Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08] 134 sequences; 9,351,186 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq22 165 2e-35 seq10 159 7e-34 seq23 158 3e-33 seq1 156 9e-33 seq24 131 4e-25 >seq22 Length=136613 Score = 165 bits (182), Expect = 2e-35 Identities = 187/250 (75%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 282853 CCTAAAAAATAAAAC---GTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTT 282909 |||||| ||| ||| || |||||| | || | | ||||| || | ||| || Sbjct 136281 CCTAAACAATTGAACAAAGTTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATT 136340 Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 | ||||| || ||||| |||| ||| || | || || || ||||| || || || |||| Sbjct 136341 CCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGA 136400 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||||||||| |||||| |||||||| ||||||||||| ||||| | ||| ||| ||| Sbjct 136401 TCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTAT 136460 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | ||||| || || | || || || |||||||| |||||||| || | |||||| |||| Sbjct 136461 CAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGA 136520 Query 283090 ATATCTGCAT 283099 | |||||||| Sbjct 136521 AAATCTGCAT 136530 >seq10 Length=648529 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || ||||| || || || || || |||||||||||||||| Sbjct 562418 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 562477 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | || || || ||||| || || ||||| |||||||||||||||||| || Sbjct 562478 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 562537 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | || || | ||||| ||||| || | ||||| Sbjct 562538 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 562597 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| | || || |||||||| || || ||||| ||||| ||||||||||| Sbjct 562598 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 562648 >seq23 Length=97376 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||| |||| ||| || | || || || ||||| || || ||||| Sbjct 117 TTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 176 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || |||||||| |||||| |||||||| ||||| ||||| ||||| | ||| || | Sbjct 177 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 236 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| |||||||| || | || || || |||||||| |||||||| || | || ||||| Sbjct 237 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 296 Query 283088 GAATATCTGCATTTT 283102 || ||||||||||| Sbjct 297 AAAAATCTGCATTTT 311 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 301477 CATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536 ||||||||| || || | | ||||||| |||| |||| ||||||| || ||||| Sbjct 45992 CATGGAGAATGCTTTGTCCTGAACGATGGTGGTGAAGTCGATTTGGATCTCGGAAACTAC 46051 Query 301537 GAACGTTTCACTTCATTAAC-CCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTT 301594 ||| | | | ||| || | || ||| | | || || |||| ||||| | || | Sbjct 46052 GAAAGAT--ATCTCAATATCACCCTAACCAGAGATCACAACATTACCACTGGTAAGGTCT 46109 Query 301595 ATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654 ||| ||| ||||||||||| ||| | | ||| |||||||||||| || || || |||| Sbjct 46110 ATTCAAAGGTTATCGAAAAGGAAAGAAACGGTGACTATCTCGGAAAAACTGTCCAGGTTG 46169 Query 301655 TTCCCCACATCACCGATG 301672 | || ||| | ||| ||| Sbjct 46170 TCCCTCACTTAACCAATG 46187 >seq1 Length=1282582 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | ||| |||| || || || || ||||||||||||||||||| Sbjct 1203328 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 1203387 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||||| | ||| || || |||||||||| ||| ||||||||| || Sbjct 1203388 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 1203447 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | || |||||||| |||| || || Sbjct 1203448 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 1203507 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | ||||| |||||||| || | ||||| ||||| || |||||||| Sbjct 1203508 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 1203558 >seq24 Length=152039 Score = 131 bits (144), Expect = 4e-25 Identities = 184/256 (72%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 |||||||||||| | || |||| | ||| || || |||| ||| ||||| || || | Sbjct 47873 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 47814 Query 317007 AGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 |||| | | | | ||| | | ||||| || || | |||||||| |||| || |||| Sbjct 47813 AGTTCT-ACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCA 47755 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| |||||||| || || || || |||||||| || | | |||||| Sbjct 47754 TCAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCA 47695 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || | || |||||||| | |||||| |||| || ||||| ||||||||||| | Sbjct 47694 AACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGT 47635 Query 317186 CACACAGGTCCTCGCC 317201 ||| || || || || Sbjct 47634 TACATAGATCTTCACC 47619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737402879636