Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08] 134 sequences; 9,351,186 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10 127 1e-24 seq22 114 9e-21 seq1 114 9e-21 seq23 104 2e-17 >seq10 Length=648529 Score = 127 bits (140), Expect = 1e-24 Identities = 171/234 (73%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||||| |||||||| | || |||||| ||||||||||| || Sbjct 562416 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 562475 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| ||||| ||||| || ||||| |||||||| || || || | Sbjct 562476 GACAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAG 562533 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 ||| | |||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 562534 GAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGA 562591 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 562592 CTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 562645 >seq22 Length=136613 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||| ||||| || |||| |||||| ||| |||||||| || |||||||| | Sbjct 136304 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 136363 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| ||||| ||||| || || ||||||||||| ||||| || | || Sbjct 136364 AGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 136421 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || ||||| | || | ||| | || || || | || || Sbjct 136422 GAATACCTTCCTTGTCTTGAATCTT-AGATTTGACGTTATCAATAGTATCTGATGACTCT 136480 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 136481 ACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 136530 >seq1 Length=1282582 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| | |||| ||| | || |||||||||||||||||| || | Sbjct 1203329 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 1203388 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || |||||||||| |||||| || || | || Sbjct 1203389 AAAGTT--CTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 1203446 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || ||||| ||| ||||| ||| | | | || ||||||| || |||| Sbjct 1203447 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 1203506 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || |||||||| ||||| |||||||| Sbjct 1203507 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 1203555 >seq23 Length=97376 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || | ||| | |||| ||| || ||| |||||||||||||||||||| Sbjct 78 CATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATC 137 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | |||| ||||| ||||| || ||||| || ||||| ||||| || Sbjct 138 AGAAAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCA 195 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| || | | | || ||||| | || Sbjct 196 GGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGAC 255 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | || || ||||| || || ||||| || || || || ||||| Sbjct 256 TCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989812090678