Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq17 86.0 6e-12 seq16 86.0 6e-12 >seq17 Length=213856 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | ||| ||||| | || || || || || ||||| || || Sbjct 220 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 161 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| || || ||||||||| ||||||||||||||||||| ||||| Sbjct 160 AGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGA 101 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | |||| | || | ||||| | | |||||| Sbjct 100 ATACCTTCCTTGTC-TTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCAC 42 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 |||| || | ||||| || || || || || || || Sbjct 41 TTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAA 3 >seq16 Length=97376 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||| | || || || ||||| ||||| ||||| | || || |||||| Sbjct 97278 AACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTC 97219 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || || ||||||||| | || | ||||||||| || ||||| || ||||| || || | Sbjct 97218 CAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCT-T 97160 Query 139675 GATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || | || | ||| | | || | ||||| | | ||||||||||| || | |||| Sbjct 97159 GAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCT 97100 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || || | ||||| || || || ||||| Sbjct 97099 TACCTGTTAGGGTTTTAACAAAAATCTGCAT 97069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063212498400