Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08]
127 sequences; 9,351,979 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq17 96.9 4e-15
seq16 86.0 6e-12
>seq17
Length=213856
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | | ||| || || | || ||||| || || |||||||| ||
Sbjct 220 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 161
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| ||||| ||||||||| ||||||||||||||||||| |||||
Sbjct 160 AGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGA 101
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || |||| | || | ||||| | | || |||
Sbjct 100 ATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACT 41
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|||| ||| | ||||| || || || || || || ||
Sbjct 40 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAA 3
>seq16
Length=97376
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034
||| || || | || ||||| ||||| ||||||||||| | || || ||||||
Sbjct 97278 AACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTC 97219
Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094
||||| ||||||||| | || | ||||||||| || ||||| || ||||| || ||
Sbjct 97218 CAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTG 97159
Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154
||| || ||| | | || | ||||| | | || || |||| ||| | |||||
Sbjct 97158 AATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTT 97099
Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | ||||| || || || |||||
Sbjct 97098 ACCTGTTAGGGTTTTAACAAAAATCTGCAT 97069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013595114640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |