Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08]
127 sequences; 9,351,979 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 2e-22
seq13 105 5e-18
>seq4
Length=588436
Score = 120 bits (132), Expect = 2e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| |||| || ||||||||||| ||||||||||| | || ||| | |
Sbjct 178563 CTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 178504
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || ||| | || || ||||||||||| ||| | ||||| |||
Sbjct 178503 TCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTG 178444
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | ||||||| | |||| |||| ||||||
Sbjct 178443 TCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 178384
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || ||||| || || || || ||||| |||||||||
Sbjct 178383 GTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 178345
>seq13
Length=1082976
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
||||| |||| |||| || |||||||| || ||||||||||| | || ||| | ||
Sbjct 542914 CTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCG 542973
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| |||| ||| || || ||| |||| | || |||||||| ||| | || || |||
Sbjct 542974 TCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 543033
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | |||||| || ||| ||||| ||| ||
Sbjct 543034 TCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATA 543093
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || ||||| | || ||||| ||||||||||||||
Sbjct 543094 GTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087372999730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |