Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq16 131 1e-25 seq17 123 2e-23 seq13 107 2e-18 seq4 105 6e-18 >seq16 Length=97376 Score = 131 bits (144), Expect = 1e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| |||||||||||||| |||| ||||| || |||||||||| ||||| | Sbjct 97065 AAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTC 97124 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || ||||| || |||||||| ||||| |||||||| || || Sbjct 97125 ATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGA 97184 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || |||||| | || ||||| || || || | || || | || | || ||||| Sbjct 97185 CCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTA 97244 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||| ||||| ||||||||| | || || ||| | |||| Sbjct 97245 CAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATT 97286 >seq17 Length=213856 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 22226 TTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCG 22285 ||||||| || |||||||| ||||| || |||||||||||||||| | | || || Sbjct 1 TTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCAGACACTA 60 Query 22286 TGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTC 22345 | ||| | | || || |||||||||||||| |||||||| || ||||| ||||||| Sbjct 61 TTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAACGTC 120 Query 22346 TTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAA 22405 | || ||||| || || || | || ||| | || | || || |||||||| || | Sbjct 121 TGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAGA 180 Query 22406 AAGAATCCACCATACATTTAGTTTTGCGATT 22436 | ||||||||| | || || ||| | |||| Sbjct 181 AGGAATCCACCCTCCACTTGGTTCTAAGATT 211 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| |||| ||||| || |||||||||| || || | | Sbjct 222 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 281 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | ||||| || |||||||||||||| |||||||| || || || Sbjct 282 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 341 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || || || | || || | || | || |||||||| Sbjct 342 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 401 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| |||||||| Sbjct 402 ATTCAAAAGGAATCCAC 418 >seq13 Length=1082976 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| || || || ||||||||||| || | || | ||||| || | Sbjct 543132 AAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTC 543073 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| ||| | ||| || |||| || |||||||||||||| || ||||| || || Sbjct 543072 CTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGA 543013 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||||||| | || ||||| || || || | || || | || | || || || Sbjct 543012 CCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTA 542953 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || || || || | || | ||| || ||||| | || ||| Sbjct 542952 CAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGT 542901 Score = 82.4 bits (90), Expect = 6e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756 || ||||||||||| || || || ||| || | | |||||| |||||||| | Sbjct 40514 ATGGAGGCCAAATTACACACTGCGATTTGGTCCCTTGAAGAGTACTCCACAATTTCACAG 40573 Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816 ||||||||| | || || || ||||| | |||| ||| |||| ||||||||| Sbjct 40574 CACAAATTAGAACATTGTATTGTACCCAAGTTGCTTTGGTTAGATTTCCTGTTGCAAGAG 40633 Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAAT 129866 ||||| |||| |||| |||| || || || || | ||| | || ||||| Sbjct 40634 TCTTTATACAACATGAACGGAGTCCCTGTCTCAATTTGAGCGTCTACAAT 40683 >seq4 Length=588436 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| || || || | |||||||| || |||| | || ||||| | Sbjct 178346 AAAATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCT 178405 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| | |||| || ||||| ||||||||||| ||||| || || Sbjct 178406 TCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGAC 178465 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| ||||| || ||||| || || || || |||||| | || | || || ||| Sbjct 178466 CAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 178525 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || || | || || || | ||||| | || ||| Sbjct 178526 AACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 178576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727350339755