Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq26 214 2e-50 seq22 113 6e-20 >seq26 Length=271150 Score = 214 bits (236), Expect = 2e-50 Identities = 682/1042 (65%), Gaps = 23/1042 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || | ||||| || || ||||| || ||||| || || |||| ||| | || | Sbjct 89595 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89536 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | || || ||| | | |||| |||| || || | || || || || |||||| Sbjct 89535 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89477 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 ||||| || || |||||||| |||||| | |||| | ||| || ||||| Sbjct 89476 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89417 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | |||||||||| ||| | | |||||||| |||||| || |||||||| || Sbjct 89416 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89357 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCA 111916 || ||||||| ||| || | | ||| ||| | || ||| ||||| || ||| Sbjct 89356 GGTTTGCACATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTAC 89298 Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976 || ||||||||||||||||| | | || || ||| ||| || || ||||| |||| Sbjct 89297 TTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCA 89238 Query 111977 AGCTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGA 112030 || || || ||| | || ||| | || | ||| ||||||||||| || || Sbjct 89237 AGGTG---GTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGA 89181 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCG 112089 ||| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | | Sbjct 89180 CATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAG 89122 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| Sbjct 89121 ACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCG 89062 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 ||||| | || || | |||| | || || || || |||| | | || || || | Sbjct 89061 ATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAAT 89002 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269 |||| | | ||| || ||||| | ||| |||| | | || | ||| Sbjct 89001 TTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCC 88942 Query 112270 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTT 112329 | | ||| | || || || || | ||||| || |||||||| |||| ||||| | Sbjct 88941 AAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGT 88882 Query 112330 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 112389 | || || || |||||| |||| | ||| || ||||| |||||||| || || || | Sbjct 88881 ATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTA 88822 Query 112390 ACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 112449 |||| || ||||| | |||| | | || ||||| ||||| |||||| | | Sbjct 88821 ACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGG 88762 Query 112450 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATG 112503 | || || ||||| || | ||| || | || || | || || | | || Sbjct 88761 CTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTG 88702 Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||| || || ||| | || ||| || || ||| | |||||| |||| || |||| Sbjct 88701 AAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAA 88642 Query 112564 ATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 |||||||||||||| ||| ||| | | ||| |||||| | | | || || | | | Sbjct 88641 ATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTG 88583 Query 112623 GGTGTCCAAGGTCTCGCGGATG 112644 ||||| |||||| | || |||| Sbjct 88582 GGTGTTCAAGGTTTAGCTGATG 88561 >seq22 Length=310694 Score = 113 bits (124), Expect = 6e-20 Identities = 349/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || |||||||||| || | || || || ||||| |||| ||| || | Sbjct 204112 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 204171 Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 | | | || || || ||||| || | | || || || ||||||||||||||| Sbjct 204172 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 204230 Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||| || || | ||| ||| |||| | ||| | |||||| ||||||||||||||||| Sbjct 204231 CTTTTCAGGAT-CTTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 204289 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGT 102334 | ||||||||| |||||||| | | ||||||||| | ||| || ||||| | | Sbjct 204290 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGCTTGCT 204349 Query 102335 GGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAA 102394 | ||||| ||| | || | ||| || || | || | ||| | | Sbjct 204350 TGCTATTTTCTCATT-TAAACAATAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATCAC 204407 Query 102395 GGAAGCCGTTGAGATTG--AGAAGGGA-TTCATATTGGATGCCCTTCCATGCGCTCTCAT 102451 || || || ||||| | | |||| | |||| | || || ||||| | | | | Sbjct 204408 AGAGGCTGTCGAGATCGAAAAAAGGTACTTCACA---GACGCTCTTCCTGTCTCCTTACT 204464 Query 102452 CGGTATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509 || ||||| ||| | ||||| | | ||| |||||| || |||| ||| | || Sbjct 204465 GGGGATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGACAGACTACTG 204522 Query 102510 AAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGA 102567 | || || ||| | || | | ||| ||| |||||||||||||||||||||| Sbjct 204523 --GTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAACAATCCATTTGACTTCATGGAGA 204580 Query 102568 ACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611 ||||| | | ||| || || ||||||||||||||||| ||| Sbjct 204581 ACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAAGAGAGTT 204624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741414571440