Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq17 179 8e-40 seq13 161 2e-34 seq112 132 1e-25 seq26 100 6e-16 >seq17 Length=213856 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| || || | |||||||||||| || ||||||||||||||||| | |||||| Sbjct 443 TCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGT 384 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| |||||||| | ||||| ||||| |||||||| || Sbjct 383 TCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACC 324 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||||| ||||| || || || || || ||||| Sbjct 323 TTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAG 264 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | ||||| Sbjct 263 AGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 222 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | ||| || ||||| || || || || ||||| || | |||||| Sbjct 215 TCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGT 156 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| || |||||||| || ||||| || ||||| || || |||||||| || Sbjct 155 TCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACC 96 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||| ||||| ||||| ||||| || ||||||||||| Sbjct 95 TTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAG 36 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || || ||||| || || || Sbjct 35 AGTGATAGTCTTACCAGTTAAAGTCTTGACAAA 3 >seq13 Length=1082976 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| ||| ||||| | ||| ||||| || || || ||||| || | ||||| Sbjct 542907 TCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGT 542966 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | ||||||||||| |||||||| || Sbjct 542967 TCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCC 543026 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||| || || |||||||| || || ||||| | Sbjct 543027 TTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAA 543086 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATG 195145 ||||| ||||| || || || || || ||||| | ||||||| || Sbjct 543087 GGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTG 543133 >seq112 Length=155 Score = 132 bits (146), Expect = 1e-25 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| ||||| | ||| ||||| || || ||||| || ||||| || | |||||| Sbjct 14 TCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGT 73 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | ||||| ||||| |||||||| || Sbjct 74 TCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACC 133 Query 195039 TTCTTTGTCTTGAATTTT 195056 ||| ||||||||||| || Sbjct 134 TTCCTTGTCTTGAATCTT 151 >seq26 Length=271150 Score = 100 bits (110), Expect = 6e-16 Identities = 203/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 160570 GATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT 160629 ||| ||||| ||||| | ||| ||| | |||| | ||||| |||||||| ||||| Sbjct 89135 GATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGT 89076 Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689 || | ||||| ||||||| ||| |||| ||| | |||||| ||||| |||| || || Sbjct 89075 AGAACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGT 89016 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 ||||| || || ||| | || |||||||||||||| || || | | | | | Sbjct 89015 CTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACA 88956 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809 | | || |||||| | || ||| | |||||||| || ||| || |||| Sbjct 88955 AACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTAC 88896 Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGC---AAGAGTAACCAGAAGAACTTTGG 160866 || || || || |||||||| ||| | || | ||||||||||||||| || Sbjct 88895 TCCATTCATGCTGTATAAGGATGC---TTGTAACAAAAAAACTAACCAGAAGAACTTGGG 88839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479794665409