Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 1e-10 >seq1 Length=591130 Score = 82.4 bits (90), Expect = 1e-10 Identities = 106/145 (73%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 171680 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 171739 |||| || ||||| ||||| |||| ||||| | | || || | || ||| | | | Sbjct 279517 GGAAGGA-AATGGGTCTCGGGAATACTTAGACTCCTTGGGATTAAAAGATAGAGAGGTTG 279575 Query 171740 GTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 171799 | ||||| || ||| | || |||||||||||| | ||| || ||||| |||| |||| Sbjct 279576 GCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGACT 279635 Query 171800 GTTATACAGATTACACAGGACAAGG 171824 || | ||||| ||||| |||||||| Sbjct 279636 GTAAGACAGACTACACTGGACAAGG 279660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530202206720