Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq16 136 4e-27 seq13 131 2e-25 seq17 125 7e-24 seq4 105 7e-18 >seq16 Length=97376 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || |||||||||||||| |||||||| || || || | ||| || || || Sbjct 97272 GTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTG 97213 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || |||||||| ||||| ||||| || || || || ||||| || |||||||| || Sbjct 97212 CTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTT 97153 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| || || ||||| || ||||| || || ||||| || Sbjct 97152 GGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGT 97093 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 || |||||||| ||||| |||||||| || Sbjct 97092 TAGGGTTTTAACAAAAATCTGCATTTTTTT 97063 >seq13 Length=1082976 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || || || ||||| | || || ||||| || ||||||||||| | | Sbjct 542902 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 542961 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | | | ||| || || || || || |||||||||||||| || || || || || Sbjct 542962 AGAGTTCT-ACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 543020 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| || ||||| ||| | |||||||| || || || Sbjct 543021 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 543080 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | ||||| || ||||||||||| || || |||||||| |||||||| Sbjct 543081 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543131 >seq17 Length=213856 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| || || | ||| || ||||||||||||||||| ||||| || | Sbjct 448 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 389 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || || || || || || |||||||| ||||| || || || Sbjct 388 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 329 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || |||||| || | || || || || || || Sbjct 328 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 269 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || ||||| |||| ||| || |||||||| ||||| Sbjct 268 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 222 Score = 113 bits (124), Expect = 5e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || | || | ||| || ||||||||||| || ||||||||||| | Sbjct 220 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 161 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || || || || || ||||| |||| ||| |||||||| || || Sbjct 160 AGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGA 101 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || || || ||| | ||||| || || ||||| Sbjct 100 ATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACT 41 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAA 134706 || ||||| || || ||||| |||||||| || || |||| Sbjct 40 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAA 1 >seq4 Length=588436 Score = 105 bits (116), Expect = 7e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || || |||||||| ||||||||||| | ||| | | | | || || | || || || Sbjct 178545 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA-TCCTCCAATTGCTTACC 178487 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| |||| |||||| || || || || || || || || || ||||| || || Sbjct 178486 AGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTT 178427 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | |||||||| || ||||| || | || || || |||||||| | || Sbjct 178426 GACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGT 178367 Query 134696 TTTAACGAAAATTTGCATTTTG 134717 || |||||||||||||||||| Sbjct 178366 CTTTACGAAAATTTGCATTTTG 178345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397597680040