Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq26 190 3e-43 seq22 129 7e-25 >seq26 Length=271150 Score = 190 bits (210), Expect = 3e-43 Identities = 935/1469 (64%), Gaps = 43/1469 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || || Sbjct 88218 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88277 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| ||||| | || | ||| | | ||| | ||| | Sbjct 88278 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88337 Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 ||||| | ||||| || | | | || | || | | ||||| ||| | || | Sbjct 88338 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88395 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 || || || || ||||| || || | || || || || | || || | | || | Sbjct 88396 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88455 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 ||||| | || || | ||||| || || || ||||||||||| || ||| | Sbjct 88456 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88515 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 ||||| || |||||||| | | || || ||||| |||| || | ||||| Sbjct 88516 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88575 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598 | ||||| | | || || | || | |||||| || ||| ||| ||| | |||| Sbjct 88576 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88634 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 |||||||| || ||||||| || || | || || || || || ||||||||||| Sbjct 88635 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88694 Query 118659 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 118712 |||||||| | | | | || |||| || || | ||| | ||||| || Sbjct 88695 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88754 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| ||||| |||| ||||| ||| || ||| || | |||||| | Sbjct 88755 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAG 88814 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| || |||||| ||||||||||| || || | ||| ||||||| ||| Sbjct 88815 CAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCA 88874 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 ||||| || |||||| |||| || || || || ||||| | || || || || | ||| Sbjct 88875 TCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAA 88934 Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | ||| | || ||| || || || || | ||||| || ||| Sbjct 88935 AGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTA 88990 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 | | ||||| || || || | | || | || || || || | | ||| |||| Sbjct 88991 CAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAA 89050 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 || | ||| | ||| || || || | |||||||| || || |||||||| | || Sbjct 89051 CAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGC 89110 Query 119069 CGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 | ||| | || | | | || || || | | || || || ||| | || | | Sbjct 89111 GGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAATGA 89169 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185 || | | ||| || || ||||| || |||| ||||| || | || || | |||| Sbjct 89170 AGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGACGTT 89226 Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 |||| | |||| ||||| | |||||| ||| || || | | ||||||||| | Sbjct 89227 TGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAA 89286 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTG 119299 |||||| || || || || || ||| | || || |||| | | || || Sbjct 89287 TACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATTATG 89344 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| |||||| || || || || |||||| || || ||| | | | | | Sbjct 89345 AATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATC 89404 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||| || || || || |||||| || | || | | ||| || |||||||| || Sbjct 89405 GTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGG 89464 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478 || ||||||||||| || ||||| || | || || |||| |||| | || || Sbjct 89465 GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATACTTCTGACTCA 89523 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | || || || || | || | |||||| || || ||||| ||||| | || | Sbjct 89524 TAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACAC 89583 Query 119539 GCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAAC- 119595 |||||| || || ||| || ||| || || |||||| | ||| | |||||| Sbjct 89584 GCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGGTAAGA 89641 Query 119596 TCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 |||| ||||||||||||| ||||| ||| Sbjct 89642 TCTT-TCCAAGGTCTTGAATCCAAAGTAG 89669 >seq22 Length=310694 Score = 129 bits (142), Expect = 7e-25 Identities = 386/586 (66%), Gaps = 25/586 (4%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| | | | || || ||||| |||||| || |||| Sbjct 204344 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 204285 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| | ||||||||||||||| || | | ||| || || || |||||||| Sbjct 204284 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 204225 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC--- 130191 ||||| ||| ||||| |||| | ||| ||||| || | | | || ||| Sbjct 204224 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAGA 204169 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || Sbjct 204168 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 204109 Query 130251 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 | | || ||| | ||| ||||||||||||||| |||| || || || || Sbjct 204108 GAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTA 204052 Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || ||| || | | | ||| || | ||| | |||| || | |||||| Sbjct 204051 AGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGG 203993 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427 | || |||||| | ||||| | | || ||| ||||| || || || Sbjct 203992 GAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGG 203933 Query 130428 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481 ||||||| || || |||| | | | | |||||| |||||| ||||||| | Sbjct 203932 CAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGAT 203876 Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541 | |||||||| | | |||||| || |||| ||||| ||||||||| | || Sbjct 203875 TATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTT 203816 Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587 |||| ||| || | || ||||| | | | ||||||| ||||| Sbjct 203815 CGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 203770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434218234120