Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq26 385 7e-102 seq22 188 1e-42 >seq26 Length=271150 Score = 385 bits (426), Expect = 7e-102 Identities = 1233/1893 (65%), Gaps = 50/1893 (3%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| || |||||||||| || | || | || ||||| || |||||||||||||| | Sbjct 87835 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 87894 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| || |||| || || || ||||| || || | ||| | | ||| | Sbjct 87895 TTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGGAGCCA 87954 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | ||||| |||| ||||||| ||||||||| | ||| |||||| || ||||| | Sbjct 87955 TCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGCCATAT 88014 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | || | Sbjct 88015 CAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTGCTCAG 88074 Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | || | ||||||||| || ||| || || || || ||| || || | || Sbjct 88075 GTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 88134 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | | ||| | || || | | | | | | |||||||||||||||||||| Sbjct 88135 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGAAATT 88194 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 |||||| ||||| | || | ||| || || || || ||||| | | | || |||| Sbjct 88195 CTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGT 88254 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 |||| |||||| | |||||||||||| ||||||||||| || | || ||||| | Sbjct 88255 AACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTA 88314 Query 75849 GACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 ||| |||| | | || |||| || ||| ||| ||||| || || || || Sbjct 88315 AACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGGGCTTC 88373 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATGT 75963 ||||| | || ||||| | ||| || | |||| | || || | | || Sbjct 88374 TTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGA----GAACCTTGGAAGGT 88429 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 |||||| | || || | | |||| |||| || || || || | | || || Sbjct 88430 TTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGAT 88489 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083 ||||| ||||||| ||||||| | || ||||| || |||||||||| | | | | Sbjct 88490 AGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTCA 88548 Query 76084 AAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 | ||||| ||||| |||| || ||||| || | | | |||||||||| | | ||| Sbjct 88549 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88608 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 | || | ||||||||||| |||||| |||| | || |||||| | || | || | Sbjct 88609 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88668 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCAT 76253 ||| ||||| | || | || || ||| | || | | | ||| Sbjct 88669 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 88728 Query 76254 C--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 | | ||| |||| |||||| ||||| || | ||||| || || ||| | | Sbjct 88729 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 88788 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATTT 76369 | |||| | || || ||| || ||| | || || | ||||| | | Sbjct 88789 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 88848 Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 | | |||| | ||||||||||| | |||||||| || | || ||||| |||||||| Sbjct 88849 TCT-GGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 88907 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT--- 76486 | |||| || | || | | ||| | | ||||| || | ||||| | Sbjct 88908 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCC 88963 Query 76487 -CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 || |||| || |||| ||| | || || |||||||||||||| | || || Sbjct 88964 ACGACCTTC-CT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCG 89021 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 | | |||||| |||| | ||| | | || | ||| || |||| | | || | | Sbjct 89022 GCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTT 89081 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 ||||| || |||||||| ||||| | ||| |||| |||| | ||| || || Sbjct 89082 TTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCT 89141 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||||| || ||| | ||| | | || || | ||||||||| || | Sbjct 89142 TTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAG 89201 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | |||| || ||||| ||||| || || || | ||| | |||||||| Sbjct 89202 TACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTG 89261 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || | || |||| |||||||||||| || || || ||||| || || |||| ||| || Sbjct 89262 TTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAG 89321 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 ||| |||||||||||| ||| | || ||||| || || |||| |||||| Sbjct 89322 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATT 89381 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | |||||| ||||| || || || ||||| || || |||||| |||| || Sbjct 89382 AAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACT 89441 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 | ||||| |||||||| | ||| || || || ||||||| |||||||| ||| Sbjct 89442 AAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCA 89501 Query 77024 TGAGTGAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC 77079 |||||||| | || ||| |||| || || |||||||||||| | | || || Sbjct 89502 TGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTC 89557 Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 |||||| || | ||| |||||||| | || || ||||| |||||| || || Sbjct 89558 ATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATT 89617 Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199 | ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || Sbjct 89618 ACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTG 89677 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 ||||||||| ||||| | |||| | || || || Sbjct 89678 AAAGTCTCTATCGTAGACAATAGCAGAGTTCAG 89710 >seq22 Length=310694 Score = 188 bits (208), Expect = 1e-42 Identities = 560/855 (65%), Gaps = 14/855 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||| || | || ||||| || || ||||| || |||| || || || Sbjct 204638 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 204579 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| ||||| | || || || | ||||| || | || | Sbjct 204578 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 204519 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| || |||||||| || | |||| ||||| || ||||| || | | Sbjct 204518 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 204459 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 ||| || ||||| || || ||| | || || ||| || |||||| || | || || Sbjct 204458 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 204400 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | | || |||||||||| | | || | ||||| ||| | || || ||||| Sbjct 204399 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 204340 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||| || | || || ||||| | ||| | || || || || || | || ||||| Sbjct 204339 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 204280 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || || | ||| || | ||| || |||| || |||||||| |||||||| || || || Sbjct 204279 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 204220 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814 ||||| ||||| || || | | || || | ||||| | || | ||||| || Sbjct 204219 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 204160 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||||| || | ||| || || || || || ||||| || || || Sbjct 204159 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 204100 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAA 46932 | || | |||||| | || ||||| || | || || || | || || Sbjct 204099 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGGAG 204042 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 |||||||| || || ||||| || |||||||| ||| ||||||| | || || ||| Sbjct 204041 TGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACC 203982 Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 || | || || ||| ||| || ||||| || || || ||| |||||||| || Sbjct 203981 TCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAG 203922 Query 47053 GCCAATACATGTTTA-ATAAAATATTTTTCAT---CGGTAGTCAGTTTATTCCAGTCATT 47108 || | || | | | || || ||||||||| || | | | ||||||||||||| Sbjct 203921 GCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 203863 Query 47109 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168 | ||| || | |||| ||| ||||| ||||| || || || || || | || || Sbjct 203862 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 203803 Query 47169 CATATTCCATATATC 47183 ||| | ||| ||||| Sbjct 203802 CATTTGCCAGATATC 203788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933268216640