Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08]
127 sequences; 9,351,979 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq16 113 1e-19
seq13 111 4e-19
seq4 107 4e-18
seq17 95.1 3e-14
>seq16
Length=97376
Score = 113 bits (124), Expect = 1e-19
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| | ||| || || | || || || || || ||||||||||||||||| | | |||
Sbjct 97290 CCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGT 97231
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
||| || ||||| || || || || || || | | |||||||| | | || ||
Sbjct 97230 TCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACC 97171
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
|||||| |||||||| || ||||||| | || | ||||||| ||| || |||||
Sbjct 97170 TTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAG 97111
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| ||||| || || || || || || || || | |||||||||
Sbjct 97110 AGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97066
>seq13
Length=1082976
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| || || || || | ||||||||| || ||||||||||| || | | |||||| ||
Sbjct 542913 TCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACC 542972
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| || || || || || || | | || ||||| | | |||||||||||
Sbjct 542973 GTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTT 543032
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || |||||| | || | | |||| || ||| ||||| | |||||
Sbjct 543033 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 543092
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || | ||||| ||||| | |||||||||
Sbjct 543093 AGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543131
>seq4
Length=588436
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| ||||| | || | ||||||||| |||||||||||||| || | |||||||| ||
Sbjct 178564 TCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 178505
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||| || | || || || ||||| || | ||| ||||| | | ||||| |||||
Sbjct 178504 ATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTT 178445
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| ||||| || ||||| | || | |||| ||| ||| || || | || ||
Sbjct 178444 GTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 178385
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || || ||||| ||||| | ||||||||
Sbjct 178384 AGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 178346
>seq17
Length=213856
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || || || || ||||||||||| || | | |||||| |||||||| |
Sbjct 200 CAAG-TGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCA 142
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||| || | | || |||||||| |||||||
Sbjct 141 GTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAA 82
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | ||||||| ||| ||||||||||| ||||| || |
Sbjct 81 TCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTAC 22
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | |||||| || ||
Sbjct 21 CAGTTAAAGTCTTGACAAA 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818922517217
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |