Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08] 127 sequences; 9,351,979 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq17 165 2e-35 seq13 159 7e-34 seq16 158 3e-33 seq4 156 9e-33 seq24 131 4e-25 seq112 109 1e-18 >seq17 Length=213856 Score = 165 bits (182), Expect = 2e-35 Identities = 187/250 (75%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 282853 CCTAAAAAATAAAAC---GTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTT 282909 |||||| ||| ||| || |||||| | || | | ||||| || | ||| || Sbjct 471 CCTAAACAATTGAACAAAGTTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATT 412 Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 | ||||| || ||||| |||| ||| || | || || || ||||| || || || |||| Sbjct 411 CCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGA 352 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||||||||| |||||| |||||||| ||||||||||| ||||| | ||| ||| ||| Sbjct 351 TCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTAT 292 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | ||||| || || | || || || |||||||| |||||||| || | |||||| |||| Sbjct 291 CAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGA 232 Query 283090 ATATCTGCAT 283099 | |||||||| Sbjct 231 AAATCTGCAT 222 Score = 163 bits (180), Expect = 6e-35 Identities = 146/183 (80%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || |||||||||||||||| ||| || | ||||| || ||||| || || ||||| Sbjct 185 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAA 126 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| |||||| || ||| |||||||| ||||||||||| ||||| | |||||| | Sbjct 125 GATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTT 66 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || ||||| |||||||| |||||||| || |||||||| || Sbjct 65 GTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGAC 6 Query 283088 GAA 283090 || Sbjct 5 AAA 3 >seq13 Length=1082976 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || ||||| || || || || || |||||||||||||||| Sbjct 542901 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 542960 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | || || || ||||| || || ||||| |||||||||||||||||| || Sbjct 542961 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 543020 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | || || | ||||| ||||| || | ||||| Sbjct 543021 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 543080 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| | || || |||||||| || || ||||| ||||| ||||||||||| Sbjct 543081 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543131 >seq16 Length=97376 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||| |||| ||| || | || || || ||||| || || ||||| Sbjct 97260 TTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 97201 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || |||||||| |||||| |||||||| ||||| ||||| ||||| | ||| || | Sbjct 97200 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 97141 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| |||||||| || | || || || |||||||| |||||||| || | || ||||| Sbjct 97140 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 97081 Query 283088 GAATATCTGCATTTT 283102 || ||||||||||| Sbjct 97080 AAAAATCTGCATTTT 97066 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 301477 CATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536 ||||||||| || || | | ||||||| |||| |||| ||||||| || ||||| Sbjct 51385 CATGGAGAATGCTTTGTCCTGAACGATGGTGGTGAAGTCGATTTGGATCTCGGAAACTAC 51326 Query 301537 GAACGTTTCACTTCATTAAC-CCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTT 301594 ||| | | | ||| || | || ||| | | || || |||| ||||| | || | Sbjct 51325 GAAAGAT--ATCTCAATATCACCCTAACCAGAGATCACAACATTACCACTGGTAAGGTCT 51268 Query 301595 ATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654 ||| ||| ||||||||||| ||| | | ||| |||||||||||| || || || |||| Sbjct 51267 ATTCAAAGGTTATCGAAAAGGAAAGAAACGGTGACTATCTCGGAAAAACTGTCCAGGTTG 51208 Query 301655 TTCCCCACATCACCGATG 301672 | || ||| | ||| ||| Sbjct 51207 TCCCTCACTTAACCAATG 51190 >seq4 Length=588436 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | ||| |||| || || || || ||||||||||||||||||| Sbjct 178576 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 178517 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||||| | ||| || || |||||||||| ||| ||||||||| || Sbjct 178516 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 178457 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | || |||||||| |||| || || Sbjct 178456 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 178397 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | ||||| |||||||| || | ||||| ||||| || |||||||| Sbjct 178396 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 178346 >seq24 Length=152050 Score = 131 bits (144), Expect = 4e-25 Identities = 184/256 (72%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 |||||||||||| | || |||| | ||| || || |||| ||| ||||| || || | Sbjct 104149 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 104208 Query 317007 AGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 |||| | | | | ||| | | ||||| || || | |||||||| |||| || |||| Sbjct 104209 AGTTCT-ACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCA 104267 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| |||||||| || || || || |||||||| || | | |||||| Sbjct 104268 TCAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCA 104327 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || | || |||||||| | |||||| |||| || ||||| ||||||||||| | Sbjct 104328 AACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGT 104387 Query 317186 CACACAGGTCCTCGCC 317201 ||| || || || || Sbjct 104388 TACATAGATCTTCACC 104403 >seq112 Length=155 Score = 109 bits (120), Expect = 1e-18 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || || Sbjct 44 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 103 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 |||||||||||| |||||| |||||||| ||||||||||| ||||| Sbjct 104 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTT 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737496759058