Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016505.1_202016-02-08]
127 sequences; 9,351,979 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq22 183 3e-41
>seq22
Length=310694
Score = 183 bits (202), Expect = 3e-41
Identities = 544/833 (65%), Gaps = 11/833 (1%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTA- 23298
||||||| || || || ||||| | || || || || ||||| || |||||||||||
Sbjct 204616 TTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCTCCATGAAGTCAAATGGATTGT 204557
Query 23299 -GAAGTATTATATACAGCTTTACAT-GATAATTCCTTTAAA-AGCCTATCTGCTACAAAT 23355
|| || | |||| |||| | | | || | || || || || || ||
Sbjct 204556 TGACGT----TGTACACCTTTTTGTTGCCCAGAGCTACCAGTAGTCTGTCAGCAACGAAC 204501
Query 23356 TCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCA 23415
|||| ||| || |||||||| |||| || || | || || |||| || ||
Sbjct 204500 TCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAGGAGACAGGAAGAGCGTCT 204441
Query 23416 TATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCA 23475
||| | |||||| || ||||| ||| | || || | ||| | ||| |||
Sbjct 204440 GTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAATCTTTTCAACGATTTCCTCA 204381
Query 23476 CTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCA 23535
|| | | || ||||||| ||| | || || ||||| ||| |||| || ||
Sbjct 204380 CTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAAGTCAGTGTGTAATCCCTCG 204321
Query 23536 TCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATC 23595
|| || | ||| | ||||| || || || || |||||||| | |||| || || | |
Sbjct 204320 TCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAAC 204261
Query 23596 CAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACA 23655
|| || || | |||||| ||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 204260 CAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACC 204201
Query 23656 AGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715
| |||| | | || ||||| | ||||||||||||| | | | ||| | ||||||
Sbjct 204200 AAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTT 204141
Query 23716 AATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCT 23775
||| | ||| ||| || || || || || || || || |||| ||||
Sbjct 204140 TCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAATTCAGACTCTTTTGGATCT 204081
Query 23776 GTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATC 23835
| || || |||||||| || || || | || || ||||| || || || |||
Sbjct 204080 TTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATC 204021
Query 23836 TGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCT 23895
|| || || ||||| ||| | ||||| | | |||||| ||| | || ||| |
Sbjct 204020 TGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACC 203961
Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955
|| ||||| || |||||||| ||| ||||||||||| ||||| || || ||
Sbjct 203960 AAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAG 203901
Query 23956 TGTCTTTCATCA--GTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012
| |||||| | ||| ||| || ||||| |||| | ||| || | || | |
Sbjct 203900 AATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATT 203841
Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATC 24065
|| ||| | |||||||| || ||| |||| |||||| |||| |||||
Sbjct 203840 TCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACATTTGCCAGATATC 203788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487172137800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |