Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08]
155 sequences; 9,360,711 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 8e-23
seq8 98.7 9e-16
seq24 95.1 1e-14
seq101 87.8 2e-12
>seq4
Length=598407
Score = 122 bits (134), Expect = 8e-23
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
||| | || |||||||||||||||||||| || || || || || |||||| | || ||
Sbjct 79028 GAAGCCAAAATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTG 79087
Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303
|| | ||||||| | | || | ||||| | || ||||||||| || | ||
Sbjct 79088 GAGTCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCT 79147
Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363
|| ||||| |||||||| || || ||||| || || ||||| || || ||| ||
Sbjct 79148 CCTGACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCT 79207
Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || ||||| ||||| || || ||| | || |||| |||||| |||| || |||
Sbjct 79208 GACTACAACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 79264
>seq8
Length=658281
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||| ||||| |||||||| ||||| | || || || || || ||| | || || ||
Sbjct 85888 CAAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGT 85947
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||||| |||| | ||||| | || ||||||||||| | || || |
Sbjct 85948 CCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTG 86007
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||| || ||| | || || ||||| || || |||||||| || ||| || || |
Sbjct 86008 ACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACT 86067
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| || || || || ||| | || ||||| || ||| |||| || ||||
Sbjct 86068 ACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTA 86121
>seq24
Length=213590
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345
||||||||||| | || || |||||||| ||| | || |||||||| || || |||||
Sbjct 213563 GACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAGCAACTGGAA 213504
Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||| || ||| | ||||| || |||||||| ||||| |||||||| ||||| |
Sbjct 213503 GACGGTAGAACTCTTTCTGATTACAATATTCAAAAGGAATCCACTCTTCACTTGGTATTA 213444
Query 31406 AGACTGAGGGGCGGT 31420
||||| || || |||
Sbjct 213443 AGACTTAGAGGTGGT 213429
>seq101
Length=228
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345
||||||||||| | || || |||||||| ||| | || |||||||| || || ||||||
Sbjct 201 GACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAGCAATTGGAA 142
Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| || ||| | || || ||||| ||||| ||||| ||||| || |||| |
Sbjct 141 GATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCACTTGGTTTTA 82
Query 31406 AGACTGAGGGGCGGTA 31421
|||||||| || ||||
Sbjct 81 AGACTGAGAGGTGGTA 66
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765536327600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |