Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08] 155 sequences; 9,360,711 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 seq8 104 2e-17 seq24 89.7 4e-13 >seq4 Length=598407 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || |||||||| | |||||||| | ||||| | || |||||||| || Sbjct 79036 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 79095 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || | ||| | || | ||| ||||| || || ||||| ||||||| Sbjct 79096 CGACACTATTGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCTCCTGACC 79154 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || ||||| || || ||||| || |||| | | ||| || || |||| Sbjct 79155 AACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACA 79214 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| || || || | || || || || || | ||||| || Sbjct 79215 ACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 79263 >seq8 Length=658281 Score = 104 bits (114), Expect = 2e-17 Identities = 148/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||| || || || ||||| || |||||||| | || || | ||||| ||||| Sbjct 85889 AAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTC 85948 Query 25055 GTCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| || Sbjct 85949 CTCCGACACCATCGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGAATTCCTCC 86005 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||||||| || | |||||||| || || ||| | ||||| | | | ||| || || Sbjct 86006 TGACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGA 86065 Query 25172 TTACAATATTCAAAAAGAATCCAC 25195 ||||| || || || || || || Sbjct 86066 CTACAACATCCAGAAGGAGTCTAC 86089 >seq24 Length=213590 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| ||||| ||||| |||||||| || || | || || || || || ||| | ||| Sbjct 213563 GACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAGCAACTGGAA 213504 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | | | ||| | ||||||||||||||||| |||||||| || || || || || Sbjct 213503 GACGGTAGAACTCTTTCTGATTACAATATTCAAAAGGAATCCACTCTTCACTTGGTATTA 213444 Query 25212 AGGCTAAGAGGAGG 25225 || || ||||| || Sbjct 213443 AGACTTAGAGGTGG 213430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327181416325