Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08]
155 sequences; 9,360,711 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 109 5e-19
seq40 98.7 1e-15
seq8 93.3 4e-14
>seq4
Length=598407
Score = 109 bits (120), Expect = 5e-19
Identities = 144/196 (73%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| ||||||||||| || ||| | ||||| | ||| ||||| | |
Sbjct 79230 GACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCA 79171
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||||||||| ||||| || || || ||||| ||| | || | || |
Sbjct 79170 AAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTGAC 79112
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| ||||||||||| | || | || ||||| || || || |
Sbjct 79111 GTTG-TCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCT 79053
Query 138599 TTACAAAAATCTGCAT 138614
|||| ||||| |||||
Sbjct 79052 TTACGAAAATTTGCAT 79037
>seq40
Length=97367
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| || || | | | || |||||||| |||||||| || | ||| | ||| ||
Sbjct 85 AACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTC 144
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
||||| ||||| | | | |||| ||| || ||||| ||||| |||||||| || || |
Sbjct 145 CAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCT-T 203
Query 138525 GATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583
|| | || | ||| | | || | ||||| | ||||||||||| | || | || |
Sbjct 204 GAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCT 263
Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || || ||||| ||||||||||||||
Sbjct 264 TACCTGTTAGGGTTTTAACAAAAATCTGCAT 294
>seq8
Length=658281
Score = 93.3 bits (102), Expect = 4e-14
Identities = 173/250 (69%), Gaps = 8/250 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | || ||| | || | | |||||||| || ||||||||||| |
Sbjct 86119 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 86060
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || ||||| ||||| | | | || | ||| |||||||| |||||
Sbjct 86059 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 86000
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| ||||| ||| | || | || |||| || | |||||||| ||||| |
Sbjct 85999 ATTCCTTCCTTGTC-TTGAATCTTGGACTTGACATTG-TCGATGGTGTCGGAGGACTCGA 85942
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA----TGGCTTAT 138621
| || | || | || ||||| || | || || || |||||||||| || ||| |
Sbjct 85941 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTTTT 85882
Query 138622 AATATTATTC 138631
||| ||| ||
Sbjct 85881 AATGTTAGTC 85872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261438491600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |