Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08] 155 sequences; 9,360,711 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 226 1e-53 seq40 158 5e-33 seq23 149 2e-30 seq24 131 7e-25 seq8 127 8e-24 seq101 113 2e-19 seq4 104 9e-17 >seq6 Length=682628 Score = 226 bits (250), Expect = 1e-53 Identities = 863/1325 (65%), Gaps = 51/1325 (4%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| |||| ||||| | | ||| ||||| ||||| ||| || ||||| Sbjct 394741 GGAAAGCCTAATATCCAAGTCGAATTTAAGGGTGAGACTAAGGTTTTCAGCCCCGAAGAG 394682 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || |||||||| || |||||||| || || || || || ||| | ||| | Sbjct 394681 ATTTCCTCCATGGTTCTAACAAAAATGAAGGATACTGCTGAGCAGTATTTGGGTGAGAAA 394622 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 | | |||||||| | |||||||| ||||| |||||||| | ||| | ||||| || Sbjct 394621 ATCAACGATGCAGTTGTCACTGTTCCTGCTTACTTCAATGACTCTCAAAGACAAGCCACC 394562 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||||||||||| || |||| |||| |||||||| || || || Sbjct 394561 AAGGATGCTGGTTTGATTGCTGGTTTGAACGTTCAAAGAATCATTAATGAGCCCACCGCT 394502 Query 451433 GCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTT 451487 || || | || || ||||| || | || | | || | || | || ||| Sbjct 394501 GCCGCAATTGCTTACGGGTTGGACAAGAAGGAT-GCAGGCCAC-GGTGAGCACAACATTC 394444 Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547 || | || ||| | |||||||||||| ||| |||| |||| || ||||| || ||| Sbjct 394443 TAATCTTCGATCTAGGTGGAGGAACTTTCGATGTTTCTCTACTATCTATTGATGA--GGG 394386 Query 451548 TATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| ||||| ||| ||||| || || | || ||||| || | ||||| Sbjct 394385 TATTTTCGAAGTCAAGGCCACCGCAGGTGACACCCACTTGGGTGGTGAGGACTTCGATAA 394326 Query 451606 TGCAATTGTGGAATGGTTGAAAACTGATGTTCAA-CGAAA-ACTAAAAGTAGATATTTCT 451663 | | || | || | | || |||||| |||| || || | |||| ||||| Sbjct 394325 CAGATTAGTCAACCACTTTATCGCCGA-GTTCAAGAGAAAGACCAAGA-AAGATCTTTCT 394268 Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAAC-----ATCAGCAGAAAAAGCTAAAATTA 451718 || ||||| | | | |||||| | || | ||| | ||| |||| || || Sbjct 394267 ACAAACCAGAGATCCCTTAGAAGACTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTG 394208 Query 451719 CACTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATT 451778 || ||| | || || || || | |||||| ||| | || || || || Sbjct 394207 TCTTC--TTCTGCTCAGAC--CT-CCATCGAGATTGATTCTTTGTTCGAGGGTATCGA-- 394155 Query 451779 ATGCTACTACTC--TTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACG 451836 | |||| ||| | || | |||| ||| || | ||| || | || | || Sbjct 394154 CTTCTACACCTCGATCACTAGAGCTAGATTCGAGGAGCTCTGTGCC--GACTTGTTCAGA 394097 Query 451837 GGTA--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATT 451894 | || | |||||||| ||| || | || || || | ||| | || || Sbjct 394096 TCCACCATCGAGCCTGTTGAGAGAGTCTTGAAAGACTCCAAGTTGGACAAATCTCAAGTT 394037 Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954 |||| ||||| | || || |||||||| ||||||| || ||| ||| || | || | Sbjct 394036 CATGAGATTGTTTTGGTTGGTGGTTCTACCAGAATTCCAAAGGTTC-AGAAAT-TAGT-T 393980 Query 451955 TCTTA-TTTTGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 ||| | |||| | || || | | | ||| | | || || || ||||| |||||| Sbjct 393979 TCTGACTTTTTCAATGGTAAGGAGCCAAACAAGTCCATCAACCCAGACGAAGCCGTTGCA 393920 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA---TGATGAAAAATTAGGA 452068 ||||||||||| || |||||||||||| | | || ||| | | || | | Sbjct 393919 TATGGTGCTGCTGTCCAAGCAGCTATTTTGTCTGG---AGATACTTCTTCCAAGACACAA 393863 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 || | | || | ||||| | ||||||||| | || ||||||| |||||||| || Sbjct 393862 GACTTGTTATTGCTGGATGTTGCTCCTCTATCTTTGGGTATTGAAACCGCTGGTGGTATC 393803 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTC-TATTCCTTGTAAAAAGAGTC--AAACATTT 452185 ||||| || | || | || |||| | | ||| | |||| |||| ||| ||| Sbjct 393802 ATGACCAAGCTGAT--CCCAAGAAACTCCACAATCCCAGCCAAAA-AGTCAGAAATCTTT 393746 Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| ||| |||||||||||||| |||||||| |||||||| || | | Sbjct 393745 TCGACATATGCTGACAACCAACCAGGTGTTTTGATTCAAGTCTTTGAAGGTGAGAGAACT 393686 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 | || || || || | || | ||| ||||| ||||||||| ||| Sbjct 393685 AGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAACTTTCTGGTATTCCTCCTGCTCCA 393626 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || |||||||||||| | |||| ||| | ||||| || |||||| | ||||| Sbjct 393625 AGAGGTGTTCCTCAAATTGAGGTCACCTTCGATATGGATGCCAACGGTATTTTGAATGTA 393566 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425 ||| ||||| || | || || | |||| ||||| ||||| || ||||| Sbjct 393565 TCTGCTGTTGAGAAGGGTACCGGTAAGACTCAAAAGATTACTATTACCAACGATAAGGGA 393506 Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485 | || || || ||||| || || | |||||| |||||| ||||||||||||||||| Sbjct 393505 AGATTGTCCAAGGAAGACATCGAGAGAATGGTTTCTGAAGCTGAAAAATTCAAGGATGAA 393446 Query 452486 GATGA 452490 || || Sbjct 393445 GACGA 393441 Score = 84.2 bits (92), Expect = 9e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 163325 AAAAAGTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATC 163384 ||| ||| |||||||||| ||||||||| ||||| | ||| ||| || ||| |||| Sbjct 368964 AAAGAGTGGGAAATTTTAGAATAGAACCACCTGGACTCTTTAGAGGAAGGGGTAGTCATC 369023 Query 163385 CAAAAATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATA 163444 | || | || | | ||| | |||||||||||| |||||||| | ||| || || | Sbjct 369024 CGAAGACTGGCAGAGTGAAGAAAAGAATATATCCCGAAGATGTAAGTTTGAACTTGAGTG 369083 Query 163445 AAAATGCACCTATTCC 163460 || |||| || ||||| Sbjct 369084 AAGATGCTCCAATTCC 369099 >seq40 Length=97367 Score = 158 bits (174), Expect = 5e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||| || || ||||| ||||| |||||||| || || ||||| Sbjct 295 AATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 236 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| || ||||||||||||||||| ||||||||||| || Sbjct 235 AGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCA 176 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||||||||| | || || ||||| ||||| || |||||| | | ||||| || Sbjct 175 GCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAA 116 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || ||||| | || || Sbjct 115 CATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGGGG 71 >seq23 Length=499647 Score = 149 bits (164), Expect = 2e-30 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | |||||||| | | |||||||| ||||| || |||| ||||| Sbjct 346020 GGAAAGCCAAACATTCAAGTTGAATTCAAAGGTGAGACTAAGGTCTTCACTCCAGAAGAG 346079 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || |||||| | || || ||||| || || || || |||| ||||| Sbjct 346080 ATCTCTTCCATGGTTTTGACCAAGATGAAGGACACTGCTGAGCAATTCCTTGGTGACAAG 346139 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| ||||| || | ||||| || ||||| ||||| || | || | || || ||| Sbjct 346140 GTTAACGATGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACT 346199 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||||| || ||| | |||| || || || || || || Sbjct 346200 AAGGATGCTGGTCTCATTGCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCT 346259 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || | ||| || ||||| | || || || || | | Sbjct 346260 GCTGCCATTGCCTACGGTTT-GGACAA--AAAAGCTGAGGGTGAGAAGAACGTTCTGATC 346316 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || || || |||||||||||| ||| |||| | || || |||||||| || | || Sbjct 346317 TTCGACTTGGGTGGAGGAACTTTCGATGTTTCTTTGCTGTCCATTGAAGACGGTATTTTC 346376 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || |||||| ||||| |||| ||||| || |||| || Sbjct 346377 GAGGTCAAGGCTACTGCTGGTGACACTCACTTAGGTGGTGAGGACTTTGACAA 346429 >seq24 Length=213590 Score = 131 bits (144), Expect = 7e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || |||||||| |||||||| ||||||||||| || |||||||| || ||| | || || Sbjct 213572 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 213513 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 ||||| ||||| || |||||| | | ||||| |||||| | ||||| | || |||||| Sbjct 213512 CAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATTCAAAAGGAATCCACTCTTCAC 213453 Query 391254 TTAGTATTAAGACTGAGAGG 391273 || ||||||||||| ||||| Sbjct 213452 TTGGTATTAAGACTTAGAGG 213433 >seq8 Length=658281 Score = 127 bits (140), Expect = 8e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || | || ||||| |||||||| | || || || || || Sbjct 85892 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTC 85951 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | | || || |||||||| |||||||||||||||||||| || Sbjct 85952 CGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 86011 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| ||||| | || || ||||| ||||| || |||||| || | || || || Sbjct 86012 ACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAA 86071 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||| | || | ||| ||||||| Sbjct 86072 CATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGG 86116 >seq101 Length=228 Score = 113 bits (124), Expect = 2e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || |||||||| |||||||| ||||||||||| || |||||||| || ||| | || || Sbjct 210 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 151 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 ||| | |||||||| |||||| | | || || || || | ||||| | || || ||| Sbjct 150 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCAC 91 Query 391254 TTAGTATTAAGACTGAGAGG 391273 || || |||||||||||||| Sbjct 90 TTGGTTTTAAGACTGAGAGG 71 >seq4 Length=598407 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || ||||| ||||| || | || || || || || Sbjct 79036 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 79095 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | || || ||||| || ||||| |||||||||||||| || Sbjct 79096 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 79155 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || ||| | || ||||| ||||||||| | || || || Sbjct 79156 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 79215 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || | ||| ||||||| Sbjct 79216 CATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGG 79260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714476346740