Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08]
155 sequences; 9,360,711 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 2e-34
seq24 159 8e-34
seq101 141 2e-28
seq31 100 6e-16
>seq8
Length=658281
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| ||| ||||| | ||| ||||| || || || ||||| || | |||||
Sbjct 86114 TCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGT 86055
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | ||||||||||| |||||||| ||
Sbjct 86054 TCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCC 85995
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || |||||| || || |||||||| || || ||||| |
Sbjct 85994 TTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAA 85935
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATG 195145
||||| ||||| || || || || || ||||| | ||||||| ||
Sbjct 85934 GGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTG 85888
>seq24
Length=213590
Score = 159 bits (176), Expect = 8e-34
Identities = 129/156 (83%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| || || | |||||||||||| || ||||||||||||||||| | ||||||
Sbjct 213435 TCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGT 213494
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| |||||||| | ||||| ||||| |||||||| ||
Sbjct 213495 TCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACC 213554
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| ||||||||||| || |||||||| |||||
Sbjct 213555 TTCCTTGTCTTGAATCTTAGATTTGACGTTATCAAT 213590
>seq101
Length=228
Score = 141 bits (156), Expect = 2e-28
Identities = 125/156 (80%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| ||||| | ||| ||||| || || ||||| || ||||| || | ||||||
Sbjct 73 TCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGT 132
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| |||||||| | ||||| ||||| |||||||| ||
Sbjct 133 TCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACC 192
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| ||||||||||| || ||| ||||| |||||
Sbjct 193 TTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAAT 228
>seq31
Length=271179
Score = 100 bits (110), Expect = 6e-16
Identities = 203/300 (68%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 160570 GATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT 160629
||| ||||| ||||| | ||| ||| | |||| | ||||| |||||||| |||||
Sbjct 182017 GATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGT 182076
Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689
|| | ||||| ||||||| ||| |||| ||| | |||||| ||||| |||| || ||
Sbjct 182077 AGAACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGT 182136
Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749
||||| || || ||| | || |||||||||||||| || || | | | | |
Sbjct 182137 CTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACA 182196
Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809
| | || |||||| | || ||| | |||||||| || ||| || ||||
Sbjct 182197 AACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTAC 182256
Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGC---AAGAGTAACCAGAAGAACTTTGG 160866
|| || || || |||||||| ||| | || | ||||||||||||||| ||
Sbjct 182257 TCCATTCATGCTGTATAAGGATGC---TTGTAACAAAAAAACTAACCAGAAGAACTTGGG 182313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479396638885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |