Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08]
155 sequences; 9,360,711 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 4e-27
seq40 134 1e-26
seq24 105 6e-18
seq101 100 3e-16
>seq8
Length=658281
Score = 136 bits (150), Expect = 4e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || |||||||||| |||||||| | ||||| || || ||
Sbjct 85893 ATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTCC 85952
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| |||||||| ||||| || |||
Sbjct 85953 GACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCAA 86012
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || || || ||||| || |||| |||| || || |||
Sbjct 86013 CAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAAC 86072
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
|| || ||||| || || | ||| |||| || ||||| | || || | |||||||
Sbjct 86073 ATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCATTGAGCCA 86132
>seq40
Length=97367
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| ||||||| ||||| ||||| ||||| || || || || || | |
Sbjct 294 ATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATCA 235
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| ||||| || ||||| || ||||| || ||
Sbjct 234 GACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCAG 175
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||| || ||||| || || || ||||| || |||| | || ||||| |||
Sbjct 174 CAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAC 115
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||||||||| || || ||||||||
Sbjct 114 ATCCAAAAGGAATCCACCCTCCACTTGGT 86
>seq24
Length=213590
Score = 105 bits (116), Expect = 6e-18
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || ||||| || || |||||||||||||| || || ||
Sbjct 213572 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 213513
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| ||||| || |||| | || ||||| || |||||||||||||| || || |||
Sbjct 213512 CAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATTCAAAAGGAATCCACTCTTCAC 213453
Query 24908 TTGGTGTT 24915
||||| ||
Sbjct 213452 TTGGTATT 213445
>seq101
Length=228
Score = 100 bits (110), Expect = 3e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || ||||| || || |||||||||||||| || || ||
Sbjct 210 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 151
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| ||| |||| | || || || ||||| ||||||||||| || || |||
Sbjct 150 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCAC 91
Query 24908 TTGGTGTT 24915
||||| ||
Sbjct 90 TTGGTTTT 83
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896728323400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |