Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08] 155 sequences; 9,360,711 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8 127 1e-24 seq4 114 9e-21 seq40 104 2e-17 seq24 96.9 2e-15 seq101 89.7 4e-13 >seq8 Length=658281 Score = 127 bits (140), Expect = 1e-24 Identities = 171/234 (73%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||||| |||||||| | || |||||| ||||||||||| || Sbjct 86122 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 86063 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| ||||| ||||| || ||||| |||||||| || || || | Sbjct 86062 GACAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAG 86005 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 ||| | |||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 86004 GAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGA 85947 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 85946 CTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 85893 >seq4 Length=598407 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| | |||| ||| | || |||||||||||||||||| || | Sbjct 79263 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 79204 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || |||||||||| |||||| || || | || Sbjct 79203 AAAGTT--CTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 79146 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || ||||| ||| ||||| ||| | | | || ||||||| || |||| Sbjct 79145 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 79086 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || |||||||| ||||| |||||||| Sbjct 79085 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 79037 >seq40 Length=97367 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || | ||| | |||| ||| || ||| |||||||||||||||||||| Sbjct 64 CATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATC 123 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | |||| ||||| ||||| || ||||| || ||||| ||||| || Sbjct 124 AGAAAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCA 181 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| || | | | || ||||| | || Sbjct 182 GGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGAC 241 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | || || ||||| || || ||||| || || || || ||||| Sbjct 242 TCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 294 >seq24 Length=213590 Score = 96.9 bits (106), Expect = 2e-15 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||| ||||| || |||| |||||| ||| |||||||| || |||||||| | Sbjct 213430 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 213489 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| ||||| ||||| || || ||||||||||| ||||| || | || Sbjct 213490 AGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 213547 Query 44229 GCACACCTTCCTTTTC 44244 | | ||||||||| || Sbjct 213548 GAATACCTTCCTTGTC 213563 >seq101 Length=228 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||||||| || |||| ||| || || ||||||||||||||||| || Sbjct 64 CATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 123 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || |||| ||||| || || ||||||||||| ||||| || Sbjct 124 AGAAAGAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCA 181 Query 44225 GAAGGCACACCTTCCTTTTC 44244 | ||| | ||||||||| || Sbjct 182 GGAGGAATACCTTCCTTGTC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989719955635