Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08] 155 sequences; 9,360,711 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 seq8 91.5 1e-13 >seq4 Length=598407 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| ||||| || | || | | || || | ||||| || || || Sbjct 79228 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAA 79169 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| ||||||||||| | |||| | |||||||||| ||| | || | | ||| Sbjct 79168 GATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 79110 Query 41791 CGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | || ||||||| ||||||||||||| || || || ||||| || || ||||||| Sbjct 79109 TGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTA 79050 Query 41850 CGAAAATCTGCATGTT 41865 ||||||| ||||| || Sbjct 79049 CGAAAATTTGCATTTT 79034 >seq8 Length=658281 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| || ||||||||| ||||| ||||| || || || | |||| || Sbjct 86101 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 86042 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| || || || |||| || |||||||| | |||| | |||||||| || Sbjct 86041 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCT-TG 85983 Query 41774 ATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 | | || | ||| || | ||| |||||| ||||| || |||| || || || Sbjct 85982 AATCTTGGACTTGACATTGTCGATG--GTGTCGGAGGACTCGACTTCCAAGGTAATAGTC 85925 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| || | ||||| |||||||||||||| || Sbjct 85924 TTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303104286000