Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016515.1_202016-02-08]
155 sequences; 9,360,711 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 2e-18
seq8 91.5 1e-13
>seq4
Length=598407
Score = 107 bits (118), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| || ||||| ||||| || | || | | || || | ||||| || || ||
Sbjct 79228 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAA 79169
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
||||| ||||||||||| | |||| | |||||||||| ||| | || | | |||
Sbjct 79168 GATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 79110
Query 41791 CGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| || ||||||| ||||||||||||| || || || ||||| || || |||||||
Sbjct 79109 TGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTA 79050
Query 41850 CGAAAATCTGCATGTT 41865
||||||| ||||| ||
Sbjct 79049 CGAAAATTTGCATTTT 79034
>seq8
Length=658281
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| || ||||||||| ||||| ||||| || || || | |||| ||
Sbjct 86101 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 86042
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| || || || |||| || |||||||| | |||| | |||||||| ||
Sbjct 86041 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCT-TG 85983
Query 41774 ATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
| | || | ||| || | ||| |||||| ||||| || |||| || || ||
Sbjct 85982 AATCTTGGACTTGACATTGTCGATG--GTGTCGGAGGACTCGACTTCCAAGGTAATAGTC 85925
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| || | ||||| |||||||||||||| ||
Sbjct 85924 TTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303104286000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |