Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq36 340 2e-88
seq16 172 7e-38
>seq36
Length=207405
Score = 340 bits (376), Expect = 2e-88
Identities = 1362/2142 (64%), Gaps = 37/2142 (2%)
Strand=Plus/Minus
Query 64828 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 64887
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 72211 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 72152
Query 64888 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 64947
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 72151 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 72092
Query 64948 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 65007
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 72091 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 72032
Query 65008 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 65067
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 72031 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 71972
Query 65068 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124
|| || | ||| | ||| ||||| || || |||| || || ||| || |
Sbjct 71971 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 71912
Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 71911 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 71852
Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 71851 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 71792
Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 71791 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 71732
Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 71731 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 71672
Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 65424
| ||| | ||| || | | || || ||| | |
Sbjct 71671 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 71612
Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 71611 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 71552
Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 71551 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 71492
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 71491 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 71432
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
| || | ||||||||||| || ||| |||| | || |||||| | || | || |
Sbjct 71431 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 71372
Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GC--------TCAT 65715
|| |||||| | || | ||| || ||| | | | || ||||
Sbjct 71371 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 71312
Query 65716 CTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 65772
| || ||| | | | || |||| ||| |||| ||||| || || ||| | |
Sbjct 71311 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 71252
Query 65773 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 65832
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 71251 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 71192
Query 65833 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 65892
|| ||| | ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct 71191 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 71132
Query 65893 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 65952
| || | || | || || | ||| | | | || || || | ||||| | |
Sbjct 71131 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 71076
Query 65953 T----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 66008
||| |||||||| | |||||| || || || ||||| | || | | |
Sbjct 71075 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 71016
Query 66009 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 66068
| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 71015 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 70956
Query 66069 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTT 66128
|| || |||||||| ||||| | ||| ||||| ||||| | ||| ||||| ||
Sbjct 70955 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 70896
Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188
|| ||||| || ||| | ||| || | || || |||||| || ||||||||
Sbjct 70895 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 70836
Query 66189 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 66248
| || | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 70835 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 70776
Query 66249 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 66308
| || |||| |||||||||||||||||| || ||||| || || || | || ||| |
Sbjct 70775 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 70716
Query 66309 CCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368
|| | |||||||||||| ||| | ||| ||||| || || |||| ||||||||
Sbjct 70715 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 70656
Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 70655 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 70596
Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 70595 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 70536
Query 66489 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544
|| || | || ||| |||| || || || |||||| || | || ||
Sbjct 70535 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 70480
Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 66604
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 70479 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 70420
Query 66605 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 66664
|| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 70419 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 70360
Query 66665 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 66724
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 70359 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 70303
Query 66725 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 66781
| | | ||| |||| | ||||| ||||| || || || || |||| || | |
Sbjct 70302 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 70243
Query 66782 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 66841
|| || | | || | | || | || | || | |||||||| ||| || || ||
Sbjct 70242 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 70183
Query 66842 TATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 66901
||||| || || | |||||||||||| || || || || | ||| || | ||
Sbjct 70182 AATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTC 70123
Query 66902 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943
|| || || |||||| || || || ||||| || | |||
Sbjct 70122 AGCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 70081
>seq16
Length=135707
Score = 172 bits (190), Expect = 7e-38
Identities = 563/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 131587 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 131528
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
|||||||| || ||||||||| | || || || | ||||| |||| | |
Sbjct 131527 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 131468
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 36045
| ||| || || || || || | ||| ||||| || ||||| || | ||||
Sbjct 131467 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 131408
Query 36046 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 131407 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 131350
Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 131349 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 131290
Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 131289 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 131230
Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 131229 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 131170
Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 36340
| || || || ||||||| | | || | | ||| ||||| ||||| |
Sbjct 131169 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 131110
Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 131109 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 131051
Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 36458
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 131050 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 130993
Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518
| |||||||| || || || || || ||||| || ||| | || |||| || || |
Sbjct 130992 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 130933
Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 36578
| || | || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 130932 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 130873
Query 36579 ACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCAT 36635
| || | || || || ||||||| || | || | | |||||||| ||||
Sbjct 130872 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 130813
Query 36636 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 36695
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 130812 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 130753
Query 36696 ACATATTCCAGATGTCATGATA 36717
|||| | |||||| || || ||
Sbjct 130752 ACATTTGCCAGATATCGTGGTA 130731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171195703800
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