Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq36 390 2e-103
seq16 174 2e-38
>seq36
Length=207405
Score = 390 bits (432), Expect = 2e-103
Identities = 1375/2138 (64%), Gaps = 29/2138 (1%)
Strand=Plus/Minus
Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849
||||||| | |||||||||||||| || | || |||| ||||| || |||||||| |
Sbjct 72211 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 72152
Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908
| || |||| || |||| || ||||| |||||||| || | ||| |||| |
Sbjct 72151 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTT- 72093
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
||| | | |||||| |||| ||||||| ||||||||| ||||| || || |||
Sbjct 72092 GGAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCA 72033
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
||||| | || || |||||||| | ||| ||||||| ||| || |||| | ||||
Sbjct 72032 GCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGT 71973
Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
| || || | ||| | ||| ||||| || || |||| ||| || ||||||
Sbjct 71972 TGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTC 71913
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | || | ||| | || || | | | | | | ||||||||| | |
Sbjct 71912 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 71853
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
||||||||||||| ||||| | || | ||| || || || || ||||| | ||
Sbjct 71852 TGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACAC 71793
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265
|| || | |||| |||||| | |||||| ||||| ||||||||||| || | | || |
Sbjct 71792 TCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCA-ACGA 71734
Query 71266 -TTTCTAAGACCATGTG-ATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323
||||| | ||| |||| | || || |||| || |||||||| | ||| || || |
Sbjct 71733 GTTTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAG 71675
Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383
| || ||||| | | || || |||
Sbjct 71674 AGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGA 71615
Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443
| || ||||| | |||||||| |||||| ||| || || || ||| ||| |
Sbjct 71614 AGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGT 71555
Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503
| || ||||| ||||||| |||| || | || ||||| || |||||| |||
Sbjct 71554 AGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTC 71495
Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563
| || ||||| || || ||||| |||||||| || | | | |||||||| | | |
Sbjct 71494 TCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCA 71435
Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623
|||| || | ||||||||||| || ||| |||| | || |||||| | || | |
Sbjct 71434 TATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGT 71375
Query 71624 TTCTGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC-------- 71674
| | || || |||||| | || | || || ||| | | | |
Sbjct 71374 TAC-GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTA 71316
Query 71675 -CATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730
|||| || ||| | | | ||| |||| ||| |||| ||||| || || |||
Sbjct 71315 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCT 71256
Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790
| | | |||| | ||||||| |||||| ||| | || ||| || ||
Sbjct 71255 TCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAG 71196
Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850
|| | || ||| | ||||||||||| ||||||||||| || || || ||||||||||||
Sbjct 71195 TTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTT 71136
Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909
|| | || | || | || || | ||| | | | || || || | | |||| |
Sbjct 71135 TCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCA 71076
Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969
| || || |||||||| | || ||| || || || ||||| | | | | |
Sbjct 71075 CGACCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGC 71017
Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029
| |||||| |||| | ||| | | || | ||| || |||| | | ||||| |||
Sbjct 71016 AAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTT 70957
Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089
||| || |||||||| ||||| | ||| |||| ||||| | ||| |||||| ||
Sbjct 70956 CATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTT 70897
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 70896 ACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTA 70837
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
| || | | || || |||||||| || || || || | || | ||| ||||| ||
Sbjct 70836 CAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTT 70777
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
| || |||| |||||||||||||||||| || | ||| || || || | || |||
Sbjct 70776 GAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGA 70717
Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
||| ||||||||||||| ||| | ||| ||||| || || |||| ||||||||
Sbjct 70716 TCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAA 70657
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 70656 AGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAA 70597
Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 70596 GAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATG 70537
Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509
|| || | || | | || | || || || |||||| || | | || ||
Sbjct 70536 AGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACC 70477
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569
||| || || | || |||||||| | || || ||||| | ||| | | || |||
Sbjct 70476 ATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATT 70417
Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629
||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||||||
Sbjct 70416 AATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 70357
Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689
|| ||||| | |||| | || || || | ||| | ||| | || || | ||
Sbjct 70356 TCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGT 70297
Query 72690 GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 72747
| ||| |||| | ||||| ||||| || || || || || | || | | ||
Sbjct 70296 G--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAAC 70239
Query 72748 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 72807
|| | | || | | || | || | || | ||||||| ||| || || || |||
Sbjct 70238 TCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATT 70179
Query 72808 CTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCT 72867
|| || || | |||||||||||| || || || || | ||| || | || ||
Sbjct 70178 CTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCA 70119
Query 72868 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905
|| || |||||| || || || ||||| || | |||
Sbjct 70118 GCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 70081
>seq16
Length=135707
Score = 174 bits (192), Expect = 2e-38
Identities = 576/883 (65%), Gaps = 16/883 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| ||| || | |||||||| || || || || || |||| || || ||
Sbjct 131587 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 131528
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||| ||||| |||||| | || || || | ||||| |||| | |
Sbjct 131527 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 131468
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952
| ||| || || | ||| || | ||| ||||| || ||||| || | ||||
Sbjct 131467 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 131408
Query 41953 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 131407 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 131350
Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 131349 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 131290
Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131
| || ||| | ||||| ||||| | ||| | || ||||| || || | || ||||
Sbjct 131289 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 131230
Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191
| || || | ||| || | ||| || ||||| ||||| ||||| ||||||||||| || |
Sbjct 131229 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 131170
Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 42247
| || || || ||||||| | | || | | ||| ||||| ||||| |
Sbjct 131169 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 131110
Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
| || ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 131109 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 131051
Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTG 42365
| | || || |||||| | || ||||| |||| || || || | || |
Sbjct 131050 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 130993
Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425
| |||||||| || || ||||| || ||||| || ||| | || |||| || || |
Sbjct 130992 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 130933
Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485
| || | || || ||| | || ||||| || || || |||||| ||| ||||| |
Sbjct 130932 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 130873
Query 42486 ACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAATCAT 42542
| || | || || || ||||||| | || | || |||||||| ||||
Sbjct 130872 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 130813
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602
| ||| ||| | |||| ||| || | |||||||| || ||||| |||| || |
Sbjct 130812 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 130753
Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|||| | ||||||||| || || | | ||||| | |||||
Sbjct 130752 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 130710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137564098200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |