Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq7 156 1e-32
seq3 134 3e-26
seq151 95.1 3e-14
seq22 89.7 1e-12
seq36 84.2 5e-11
>seq7
Length=465615
Score = 156 bits (172), Expect = 1e-32
Identities = 170/225 (76%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| ||||| | ||| | ||| ||||||||||||| ||||||||||| |||||| || ||
Sbjct 231931 TCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 231872
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| || || ||||| |||||||| ||||| ||| |||||| ||
Sbjct 231871 ATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTT 231812
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||||||||| ||| ||| || | ||||| | | || || ||||| |||||
Sbjct 231811 GTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 231752
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGC 199638
|||||||| || || || || || |||||||| |||||| ||
Sbjct 231751 AGTCTTACCGGTAAGGGTCTTTACGAAAATTTG---CATTTTGGC 231710
>seq3
Length=704226
Score = 134 bits (148), Expect = 3e-26
Identities = 167/228 (73%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| || ||||| | ||| |||||||| |||| ||||||||||| || ||| || ||
Sbjct 132053 TCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACC 131994
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || || || | ||| || ||||| ||| |||||||||
Sbjct 131993 GTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTT 131934
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| ||| || |||| |||||| | | || || ||||| || ||
Sbjct 131933 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 131874
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641
|||||||| || | || || || ||||| || |||||| | |||
Sbjct 131873 AGTCTTACCGGTTAAGGTCTTGACGAAAATCTG---CATTTTTGTCTT 131829
>seq151
Length=190
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||| | || | ||||||||| || |||||||||| ||||||||||| | ||| ||
Sbjct 102 AGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTA 43
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGG 199513
|||||||||| ||||| || |||||||| | ||| ||||||
Sbjct 42 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGG 1
>seq22
Length=213744
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | |||||| || || ||||| |||| ||||||||||| | ||| || ||
Sbjct 100 TCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACC 41
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG 199512
||||||||| ||||| || || ||||| ||||| |||||
Sbjct 40 ATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTG 2
>seq36
Length=207405
Score = 84.2 bits (92), Expect = 5e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| ||||| || | ||||| || ||||| || | ||| ||| | | ||| || |
Sbjct 71168 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 71109
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || ||
Sbjct 71108 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 71049
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
| || || || || | || || | ||| |||| || |||||||| | ||| | ||
Sbjct 71048 AATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAAC 70989
Query 167948 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 167991
|| |||||| ||| || || || || || |||||||| || ||
Sbjct 70988 AGGGTCCAATCGCCATTCTGT-TCTACTCTTTTCATGAACAGATC 70945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178918654538065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |