Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08] 195 sequences; 9,366,705 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq36 214 2e-50 seq16 113 6e-20 >seq36 Length=207405 Score = 214 bits (236), Expect = 2e-50 Identities = 682/1042 (65%), Gaps = 23/1042 (2%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || | ||||| || || ||||| || ||||| || || |||| ||| | || | Sbjct 70445 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 70504 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | || || ||| | | |||| |||| || || | || || || || |||||| Sbjct 70505 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 70563 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 ||||| || || |||||||| |||||| | |||| | ||| || ||||| Sbjct 70564 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 70623 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | |||||||||| ||| | | |||||||| |||||| || |||||||| || Sbjct 70624 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 70683 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCA 111916 || ||||||| ||| || | | ||| ||| | || ||| ||||| || ||| Sbjct 70684 GGTTTGCACATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTAC 70742 Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976 || ||||||||||||||||| | | || || ||| ||| || || ||||| |||| Sbjct 70743 TTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCA 70802 Query 111977 AGCTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGA 112030 || || || ||| | || ||| | || | ||| ||||||||||| || || Sbjct 70803 AGGTG---GTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGA 70859 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCG 112089 ||| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | | Sbjct 70860 CATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAG 70918 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| Sbjct 70919 ACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCG 70978 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 ||||| | || || | |||| | || || || || |||| | | || || || | Sbjct 70979 ATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAAT 71038 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269 |||| | | ||| || ||||| | ||| |||| | | || | ||| Sbjct 71039 TTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCC 71098 Query 112270 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTT 112329 | | ||| | || || || || | ||||| || |||||||| |||| ||||| | Sbjct 71099 AAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGT 71158 Query 112330 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 112389 | || || || |||||| |||| | ||| || ||||| |||||||| || || || | Sbjct 71159 ATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTA 71218 Query 112390 ACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 112449 |||| || ||||| | |||| | | || ||||| ||||| |||||| | | Sbjct 71219 ACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGG 71278 Query 112450 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATG 112503 | || || ||||| || | ||| || | || || | || || | | || Sbjct 71279 CTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTG 71338 Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||| || || ||| | || ||| || || ||| | |||||| |||| || |||| Sbjct 71339 AAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAA 71398 Query 112564 ATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 |||||||||||||| ||| ||| | | ||| |||||| | | | || || | | | Sbjct 71399 ATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTG 71457 Query 112623 GGTGTCCAAGGTCTCGCGGATG 112644 ||||| |||||| | || |||| Sbjct 71458 GGTGTTCAAGGTTTAGCTGATG 71479 >seq16 Length=135707 Score = 113 bits (124), Expect = 6e-20 Identities = 349/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || |||||||||| || | || || || ||||| |||| ||| || | Sbjct 131061 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 131120 Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 | | | || || || ||||| || | | || || || ||||||||||||||| Sbjct 131121 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 131179 Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||| || || | ||| ||| |||| | ||| | |||||| ||||||||||||||||| Sbjct 131180 CTTTTCAGGAT-CTTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 131238 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGT 102334 | ||||||||| |||||||| | | ||||||||| | ||| || ||||| | | Sbjct 131239 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGCTTGCT 131298 Query 102335 GGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAA 102394 | ||||| ||| | || | ||| || || | || | ||| | | Sbjct 131299 TGCTATTTTCTCATT-TAAACAATAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATCAC 131356 Query 102395 GGAAGCCGTTGAGATTG--AGAAGGGA-TTCATATTGGATGCCCTTCCATGCGCTCTCAT 102451 || || || ||||| | | |||| | |||| | || || ||||| | | | | Sbjct 131357 AGAGGCTGTCGAGATCGAAAAAAGGTACTTCACA---GACGCTCTTCCTGTCTCCTTACT 131413 Query 102452 CGGTATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509 || ||||| ||| | ||||| | | ||| |||||| || |||| ||| | || Sbjct 131414 GGGGATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGACAGACTACTG 131471 Query 102510 AAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGA 102567 | || || ||| | || | | ||| ||| |||||||||||||||||||||| Sbjct 131472 --GTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAACAATCCATTTGACTTCATGGAGA 131529 Query 102568 ACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611 ||||| | | ||| || || ||||||||||||||||| ||| Sbjct 131530 ACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAAGAGAGTT 131573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740886940400