Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq14 143 3e-29
>seq14
Length=597408
Score = 143 bits (158), Expect = 3e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266
|| ||| |||||| ||||| ||||||| || || || || | || || | || |||
Sbjct 562045 ATTGGTAAAGGATTTTATGGCACCATTATCCCTCCTGTGATTCTTCGTAATTTGCTCGAG 561986
Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326
||||| | ||||||||||||||||| || ||||| | || || ||||||| |||||
Sbjct 561985 AATCCAGGATGGTACACATCTTACACCCCATATCAGCCCGAAGTAAGTCAGGGACGATTG 561926
Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386
||| |||| |||||| |||||| |||||| || || ||||| | || | || ||
Sbjct 561925 GAAAGTTTACTCAATTTCCAAACTGTCATCAGTGATCTGACAGGCCTCCCGGTCGCCAAT 561866
Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|| ||||| || ||||| | ||||||| ||||||||||||
Sbjct 561865 GCTTCTCTTTTGGATGAGTCGTCTGCAGCTGCAGAAGCAATG 561824
Score = 114 bits (126), Expect = 1e-20
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATAT 154929
||| ||| |||| ||||| || ||| |||| | |||||| || |||| | | ||
Sbjct 560348 TATGATGGTTACCTACCCTTCCACATATGGACTTTTTGAACCTGGTATTATTGATGCCAT 560289
Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989
|| ||| | ||| || |||||||||| |||||| | ||||| || || | ||||| |
Sbjct 560288 C-AATATCATCCATAACCATGGTGGTCAAGTATATTTAGATGGTGCTAACATGAATGCTC 560230
Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049
| || ||| || || ||| | || || || ||||||||||||||||| |||||||
Sbjct 560229 AAGTGGGATTAACATCCCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTACATA 560170
Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
| || || ||||| ||||| || ||||| || || || || ||||| ||||
Sbjct 560169 AGACTTTTGCCATTCCTCATGGCGGAGGAGGACCGGGTGTTGGCCCTATTTGTGT 560115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211388168800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |