Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq36 150 9e-32
seq3 111 8e-20
>seq36
Length=207405
Score = 150 bits (166), Expect = 9e-32
Identities = 344/511 (67%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| | |||||| |||| || || ||| | | ||| || | ||| || |
Sbjct 70999 TTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGA 70940
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||||| || ||||| ||||| ||||| || || ||||| || || ||||| |
Sbjct 70939 TCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAA 70880
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | ||| |||| || || | |||||||| || || || | |||||| |||
Sbjct 70879 TATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG 70820
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
| ||| |||||||| || || || | ||||| | ||||| || ||| |||||
Sbjct 70819 GACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTG 70760
Query 26130 GAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188
||| |||| ||| | ||| ||||| || | | ||| | ||||||||| | | ||||
Sbjct 70759 GAA-TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATA 70701
Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAA 26246
| ||| || | ||| ||||||||||| ||| || || ||||| || | |||
Sbjct 70700 TTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAA 70641
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306
|||||| |||| |||| || ||| | ||| | | ||| ||||| || || |
Sbjct 70640 --GTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACA 70583
Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366
||| | |||| || || | ||||| | || || | |||||||| |||| |||
Sbjct 70582 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATA--CTT 70525
Query 26367 C--ACTCAAAGCTGTATAAGTTTCAAGAACT 26395
| ||||| | |||||||||||| ||||
Sbjct 70524 CTGACTCATAAAGTTATAAGTTTCAATAACT 70494
>seq3
Length=704226
Score = 111 bits (122), Expect = 8e-20
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||| | || ||||| |||||||| | || |||||||||| || || ||
Sbjct 634151 CCAGTCCTCATTCTTTTCGACTTTTTCCATAAAAAGGTCGGGAATCCACAAAGCGTAGAA 634092
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
||||||||| ||||| || || || || |||||||||||| | | | || ||||||||
Sbjct 634091 TAAATCTCTGGCTCTGATCTCCTCCTTGCCGTGATTCTTTCTCAAGTTCAACAAATCAAA 634032
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061
| ||| ||||||||| |||| ||| || |||||
Sbjct 634031 CACTTCTTCGTGCCATGGCTCTAGATAAATGGCAAA 633996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039398634625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |