Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08] 195 sequences; 9,366,705 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq36 150 9e-32 seq3 111 8e-20 >seq36 Length=207405 Score = 150 bits (166), Expect = 9e-32 Identities = 344/511 (67%), Gaps = 10/511 (2%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| | |||||| |||| || || ||| | | ||| || | ||| || | Sbjct 70999 TTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGA 70940 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||||| || ||||| ||||| ||||| || || ||||| || || ||||| | Sbjct 70939 TCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAA 70880 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | ||| |||| || || | |||||||| || || || | |||||| ||| Sbjct 70879 TATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG 70820 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 | ||| |||||||| || || || | ||||| | ||||| || ||| ||||| Sbjct 70819 GACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTG 70760 Query 26130 GAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188 ||| |||| ||| | ||| ||||| || | | ||| | ||||||||| | | |||| Sbjct 70759 GAA-TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATA 70701 Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAA 26246 | ||| || | ||| ||||||||||| ||| || || ||||| || | ||| Sbjct 70700 TTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAA 70641 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306 |||||| |||| |||| || ||| | ||| | | ||| ||||| || || | Sbjct 70640 --GTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACA 70583 Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366 ||| | |||| || || | ||||| | || || | |||||||| |||| ||| Sbjct 70582 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATA--CTT 70525 Query 26367 C--ACTCAAAGCTGTATAAGTTTCAAGAACT 26395 | ||||| | |||||||||||| |||| Sbjct 70524 CTGACTCATAAAGTTATAAGTTTCAATAACT 70494 >seq3 Length=704226 Score = 111 bits (122), Expect = 8e-20 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||| | || ||||| |||||||| | || |||||||||| || || || Sbjct 634151 CCAGTCCTCATTCTTTTCGACTTTTTCCATAAAAAGGTCGGGAATCCACAAAGCGTAGAA 634092 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 ||||||||| ||||| || || || || |||||||||||| | | | || |||||||| Sbjct 634091 TAAATCTCTGGCTCTGATCTCCTCCTTGCCGTGATTCTTTCTCAAGTTCAACAAATCAAA 634032 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061 | ||| ||||||||| |||| ||| || ||||| Sbjct 634031 CACTTCTTCGTGCCATGGCTCTAGATAAATGGCAAA 633996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039398634625