Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 4e-28
>seq14
Length=597408
Score = 140 bits (154), Expect = 4e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
|||||| ||||| ||||||| | ||||| || ||||| || || || | || | ||
Sbjct 561824 CATTGCTTCTGCAGCTGCAGACGACTCATCCAAAAGAGAAGCATTGGCGACCGGGAGGCC 561883
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| || || |||||| |||||| |||||| |||| |||||||| ||||||| ||
Sbjct 561884 TGTCAGATCACTGATGACAGTTTGGAAATTGAGTAAACTTTCCAATCGTCCCTGACTTAC 561943
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | ||||| || ||||||||||||||||| | |||||||| || | || || |
Sbjct 561944 TTCGGGCTGATATGGGGTGTAAGATGTGTACCATCCTGGATTCTCGAGCAAATTACGAAG 562003
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080
|| || || || ||||||| ||||| |||||| ||| ||
Sbjct 562004 AATCACAGGAGGGATAATGGTGCCATAAAATCCTTTACCAAT 562045
Score = 123 bits (136), Expect = 3e-23
Identities = 131/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||| |||||| || || || || ||||| || ||||| ||||| || |||||||||
Sbjct 560115 ACACAAATAGGGCCAACACCCGGTCCTCCTCCGCCATGAGGAATGGCAAAAGTCTTATGT 560174
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|||||||||||||||||||| || || ||| | ||| || || || || || |||
Sbjct 560175 AAATTTAGATGACATACATCAGCTCCCAGGTCTCCTGGGGATGTTAATCCCACTTGAGCA 560234
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTT 138355
|| | || |||||||| | |||||| |||||||||| || ||| | ||| ||
Sbjct 560235 TTCATGTTAGCACCATCTAAATATACTTGACCACCATGGTTATGGATGATATT 560287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996988691400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |