Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08] 195 sequences; 9,366,705 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq36 327 2e-84 seq16 212 9e-50 >seq36 Length=207405 Score = 327 bits (362), Expect = 2e-84 Identities = 1221/1901 (64%), Gaps = 41/1901 (2%) Strand=Plus/Minus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | |||||||||||||| | | || | || ||||| || |||||||||| Sbjct 72211 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 72152 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || || | ||| |||| || || || |||||||| || | ||| | ||| Sbjct 72151 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 72092 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 || | | ||||| |||| ||| ||| ||||||||| | ||| |||||| || | Sbjct 72091 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 72032 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | |||||| ||||||||| ||| ||||||| |||||| ||| ||| | | Sbjct 72031 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 71972 Query 68603 CATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 || || | | | | ||||||||| || || || || || || ||| || | Sbjct 71971 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 71912 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | ||| | ||| | ||| || | | | | | | |||||||| |||| Sbjct 71911 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 71852 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 ||||||| |||| ||| || | || | ||| || || || || ||||| | | | | Sbjct 71851 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 71792 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 | || | ||||||||||| | |||||| ||||| ||||||||||| || | || | Sbjct 71791 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 71732 Query 68840 TTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 |||| | ||| |||| | | | || |||| || || ||| ||||| || ||||| Sbjct 71731 TTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAG 71673 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || | ||| | || ||||| | ||| || | | ||| || || | | Sbjct 71672 GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAG 71613 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 ||||| || | |||||| | | |||| ||| || || || || | | || Sbjct 71612 GTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAG 71553 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 || ||||| ||||||| |||| || | || |||||| || ||| || ||| | | | Sbjct 71552 ATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCT 71494 Query 69079 AAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 || ||||| ||||| || || || ||||| || | | | |||||||||| | | | Sbjct 71493 CAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCAT 71434 Query 69138 ATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197 ||| || || ||||||||||| || ||| |||| | || |||||| | || | || Sbjct 71433 ATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTT 71374 Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAAC 69257 || || ||||| | || | || || ||| | | | | | || | Sbjct 71373 ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATC 71314 Query 69258 A--------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATT 69305 | |||| | | || || | ||| || | ||||| || || ||| | Sbjct 71313 ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTC 71254 Query 69306 AGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATT 69365 | | |||| | || || || || ||| |||| || |||| || Sbjct 71253 CGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTT 71194 Query 69366 TTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTC 69425 | ||| ||| | ||||||||||| || ||||| || || || || |||||||||||||| Sbjct 71193 CTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTC 71134 Query 69426 AATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA--- 69482 | || | || | || | | ||||| || || || ||| |||| Sbjct 71133 TGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT---GGT-TTGTCTTC 71078 Query 69483 -ACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539 ||| || ||||| ||| | ||| | || || ||||||||||| | || || Sbjct 71077 CACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGACGTC 71020 Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599 | | |||||| |||| ||||| | | || | ||| | ||| | | |||| Sbjct 71019 GGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCT 70960 Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||| || ||||| || ||||| | ||| || | ||||| | ||| | || || Sbjct 70959 TTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTC 70900 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 || || || || || ||| | || | | || || | ||||||||| || | Sbjct 70899 TTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAA 70840 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 || | || | | || || ||||| || || || || || | || | |||||||| Sbjct 70839 GTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTT 70780 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 || |||| |||| ||| |||||||||||||| || |||| || || |||| ||| || Sbjct 70779 GTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTA 70720 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 |||| | || ||||||||| ||| | ||| ||||| || || |||| ||||| Sbjct 70719 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGAT 70660 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959 || |||||| ||||| || || || || || || || ||||| |||| || Sbjct 70659 TAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAAC 70600 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 | ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 70599 TAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 70540 Query 70020 GTGAGTGAACCATTT----TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075 |||||||| | || ||| |||| || || ||||||||| || | | || | Sbjct 70539 ATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGT 70484 Query 70076 C-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134 | ||| |||||| || || || |||||||| | || || ||||| |||||| | Sbjct 70483 CATCAC-CATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA 70425 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||| ||| ||| ||| ||||| ||| |||||| || || || ||||| ||||| || Sbjct 70424 TTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATAC 70365 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||||||||| ||||| | |||| |||| || || | ||| Sbjct 70364 TGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 70324 >seq16 Length=135707 Score = 212 bits (234), Expect = 9e-50 Identities = 565/854 (66%), Gaps = 12/854 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | || ||||| || || ||||| || |||| || || || Sbjct 131587 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 131528 Query 39386 TCCATGAAATCAAACGGATTAGTTG-CATTATAtttttttttAAATCCTAATTCTGAAAT 39444 |||||||| ||||| ||||| |||| | || || ||||| || | || | Sbjct 131527 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 131469 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 | ||| || ||||| || || | || ||||| || ||||| || | | Sbjct 131468 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 131409 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || || ||||| || || | || ||||||||| || || |||||||| || || Sbjct 131408 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 131349 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | || | || ||||| | | || |||||| ||| | ||||| || || Sbjct 131348 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 131289 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||| |||| ||||| ||||| | ||| | || || || || || | || ||||| Sbjct 131288 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 131229 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 ||||| | ||| || | ||| || || | |||||||||||| ||||||||||| || || Sbjct 131228 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 131169 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTT 39801 || || || || ||||| | | || || | || | |||| | ||||| | Sbjct 131168 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 131109 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||| ||||| || |||||| | ||| || || || || || ||||| || || Sbjct 131108 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 131050 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | || | |||||| | || ||||| || | || || | || || | Sbjct 131049 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGT 130990 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | ||||| || ||| ||||| || |||||||| ||| ||||||| | || ||| |||| Sbjct 130989 GAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCT 130930 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | | || || ||||| |||| |||||||| || || || ||| || ||||| || | Sbjct 130929 CAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 130870 Query 40041 CCAATACATGTTTA-ATAAAATATTTTTC---ATCGGGTGTCAATTTATTCCAGTCATTG 40096 | | || | | | || || ||||||| |||| | ||||||||||||| Sbjct 130869 CAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGC 130811 Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156 | ||| || | |||| ||| ||||| |||||||| || || || |||| |||||| Sbjct 130810 AAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTAC 130751 Query 40157 ATGTTCCATATATC 40170 || | ||| ||||| Sbjct 130750 ATTTGCCAGATATC 130737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907125659800