Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08] 162 sequences; 9,346,869 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq29 113 1e-19 >seq29 Length=103087 Score = 113 bits (124), Expect = 1e-19 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 319776 AATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 319835 ||||||||||| | | |||| | || || || |||| ||||| || ||||| | Sbjct 55080 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 55139 Query 319836 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCAT 319895 |||| | | |||| ||| ||||| || |||| || ||||| ||||||| | ||| Sbjct 55140 AGTTCTACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCAT 55199 Query 319896 CAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAG 319955 || ||||| ||||| || ||||| || ||||| ||||| || || | | | |||| Sbjct 55200 CAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCAA 55259 Query 319956 GTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 320015 ||| | || |||||||| | || || |||| || ||||| || || ||||| | Sbjct 55260 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 55319 Query 320016 ACACAGATCCTCACC 320030 ||| ||||| ||||| Sbjct 55320 ACATAGATCTTCACC 55334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821804354060