Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq29 113 1e-19
>seq29
Length=103087
Score = 113 bits (124), Expect = 1e-19
Identities = 178/255 (70%), Gaps = 0/255 (0%)
Strand=Plus/Plus
Query 319776 AATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 319835
||||||||||| | | |||| | || || || |||| ||||| || ||||| |
Sbjct 55080 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 55139
Query 319836 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCAT 319895
|||| | | |||| ||| ||||| || |||| || ||||| ||||||| | |||
Sbjct 55140 AGTTCTACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCAT 55199
Query 319896 CAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAG 319955
|| ||||| ||||| || ||||| || ||||| ||||| || || | | | ||||
Sbjct 55200 CAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCAA 55259
Query 319956 GTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 320015
||| | || |||||||| | || || |||| || ||||| || || ||||| |
Sbjct 55260 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 55319
Query 320016 ACACAGATCCTCACC 320030
||| ||||| |||||
Sbjct 55320 ACATAGATCTTCACC 55334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821804354060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |