Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq38 405 7e-108
seq42 183 4e-41
>seq38
Length=207422
Score = 405 bits (448), Expect = 7e-108
Identities = 1376/2135 (64%), Gaps = 23/2135 (1%)
Strand=Plus/Minus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 72206 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 72147
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || |||| || |||| || || || |||||||| || | ||| | | |
Sbjct 72146 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 72087
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 72086 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 72027
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 72026 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 71967
Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
|| || | ||| | ||| ||||| || || |||| || || ||| || |
Sbjct 71966 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 71907
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| | || | ||| | || || | | | | | | |||||||| | ||
Sbjct 71906 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 71847
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
|||||||||||| ||||| | || | ||| || || || || ||||| | | |
Sbjct 71846 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 71787
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
| || | |||| |||||| | |||||| || || ||||||||||| || | || |
Sbjct 71786 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 71727
Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243
|||| | ||| || || || |||| || |||||||| ||||| || ||||| |
Sbjct 71726 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 71667
Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303
| | ||| | |||||||| | ||| || | | || || ||| | | |
Sbjct 71666 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 71607
Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363
|||| || | |||||| | |||||||||| || || || ||| | | || |
Sbjct 71606 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 71547
Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423
| ||||| ||||||| |||| || | || |||||| | |||||| ||| | |
Sbjct 71546 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 71487
Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 71486 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 71427
Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543
| || | ||||||||||| || ||| |||| | || |||||| | || | || |
Sbjct 71426 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 71367
Query 79544 TGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---------CA 79593
|| || |||||| | || | || || ||| | | | | ||
Sbjct 71366 -GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCA 71308
Query 79594 TCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650
|| || ||| | | | || || | ||| |||| ||||| || || ||| |
Sbjct 71307 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCC 71248
Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710
| | |||| | |||||| ||| |||||| | |||||| || || ||
Sbjct 71247 GGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTC 71188
Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770
| || ||| | ||||||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct 71187 TTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 71128
Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCT 79829
| || | || | || || | ||| | | | || || || | | ||| |
Sbjct 71127 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGA 71068
Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
| || || |||||||| | || ||| || || || ||||| | || ||| | |
Sbjct 71067 CCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAG 71009
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|||||| ||| ||| | | || | ||| || |||| | | ||||| ||||||
Sbjct 71008 GCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCAT 70949
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|| |||||||| ||||| | ||| |||| ||||| | ||| |||||| || ||
Sbjct 70948 GAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACC 70889
Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069
||||| || ||| | ||| || | || || | |||||| || |||||||| |
Sbjct 70888 ATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAA 70829
Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129
|| | | || || |||||||| || || || || | || | ||| ||||| || |
Sbjct 70828 AGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAA 70769
Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189
|| |||| |||||||||||||||||| || ||||| || || || | || ||| |||
Sbjct 70768 GACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCC 70709
Query 80190 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 80249
|||||||||||||| ||| | ||| ||||| || || |||| |||||||| ||
Sbjct 70708 TGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGC 70649
Query 80250 GCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309
||| || || ||||| || ||||| || || ||||| |||| || || ||
Sbjct 70648 ACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAA 70589
Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369
||| |||||||| | || || || || ||||| | |||||||| || || ||
Sbjct 70588 ACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGT 70529
Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429
|| | || | | || | || || || |||||| || | | || || |||
Sbjct 70528 GAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATG 70469
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
||| || | || |||||||| | || ||| ||||| | ||| | | || ||| ||
Sbjct 70468 AATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAAT 70409
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
| ||| | ||||||| ||||||| || || || ||||| ||||| || ||||||||
Sbjct 70408 TCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCT 70349
Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT 80609
||||| | |||| | ||||| || | ||| | ||| | || | | |||
Sbjct 70348 ATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGTG-- 70291
Query 80610 ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667
||| |||| | ||||| ||||| || || || || || | || | | || ||
Sbjct 70290 TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAACTCT 70231
Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727
| | || | | || | || | || | ||||||| ||| || || || |||||
Sbjct 70230 TTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATTCTT 70171
Query 80728 GCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 80787
|| || |||||||||||||| || || || || | ||| || | || || ||
Sbjct 70170 GCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCAGCA 70111
Query 80788 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822
|| |||||| || || || ||||| || | |||
Sbjct 70110 AGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 70076
>seq42
Length=135705
Score = 183 bits (202), Expect = 4e-41
Identities = 579/883 (66%), Gaps = 16/883 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 4119 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 4178
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| ||||| |||||| | || || || | ||||| |||| | |
Sbjct 4179 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 4238
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 49847
| ||| || || || || || | ||| ||||| || ||||| || | ||||
Sbjct 4239 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 4298
Query 49848 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906
| | |||||||| | || ||| | | || ||| || || || ||||| ||||
Sbjct 4299 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 4356
Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966
| | |||| |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 4357 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 4416
Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026
| || ||| | ||||||||||| | ||| || || ||||| || || | || ||||
Sbjct 4417 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 4476
Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086
| || || | ||| || | ||| || || || ||||| || || ||||||||||| || |
Sbjct 4477 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 4536
Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTC-TCCATAACTG--GCGCTGTCATGTATCCA-C 50142
| || || || |||||||| | | || | | | || || ||| ||||| |
Sbjct 4537 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 4596
Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202
| || ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 4597 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 4655
Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 50260
| | || || |||||| | |||||||| |||| || || || | || |
Sbjct 4656 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 4713
Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320
| |||||||| || || ||||| || ||||| || ||| | || |||| || || |
Sbjct 4714 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 4773
Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380
| || | || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 4774 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 4833
Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCAT 50437
| || | || || || |||||| | | | | || | |||||||| ||||
Sbjct 4834 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 4893
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
| ||| ||| | |||| ||| || | |||||||| || || || |||| || |
Sbjct 4894 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 4953
Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|||| | |||||| || || || | | ||||| | |||||
Sbjct 4954 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 4996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267345505680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |