Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq38 185 1e-41
seq42 127 2e-24
>seq38
Length=207422
Score = 185 bits (204), Expect = 1e-41
Identities = 940/1473 (64%), Gaps = 53/1473 (4%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 71817 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 71758
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| |||||||| ||||| | || | ||| | | ||| | ||| |
Sbjct 71757 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 71698
Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119
||||| | ||||| || | | | || | || | | ||||| ||| | || |
Sbjct 71697 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 71640
Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179
|| || || || ||||| || || | || || ||||| | || || | | || |
Sbjct 71639 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 71580
Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 71579 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 71520
Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299
||||| || |||||||| | | || || ||||| |||| || | |||||
Sbjct 71519 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 71460
Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 114358
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 71459 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 71401
Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 71400 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 71341
Query 114419 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 114472
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 71340 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 71281
Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 71280 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 71224
Query 114533 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 71223 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 71164
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|||||||| || |||||| |||| || || || || ||||| | || || || || | |
Sbjct 71163 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 71104
Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 114705
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 71103 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 71048
Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765
||| | | ||||| || || || | | || | || || || || | | ||| |
Sbjct 71047 GTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGA 70988
Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825
||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 70987 GAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAA 70928
Query 114826 AGCTGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884
||| | ||| | || | | | || || || | | || || || ||| | || |
Sbjct 70927 AGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAA 70869
Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGAC 114944
||| | | ||| || || ||||| || |||| ||||| || | || || | |||
Sbjct 70868 TGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGAC 70812
Query 114945 G------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998
| |||| | |||| ||||| | || ||| || || || | | ||||||||
Sbjct 70811 GTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAA 70752
Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATC 115056
| ||||||| || || || || || ||| | || || |||| | | ||
Sbjct 70751 TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATT 70694
Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116
||| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 70693 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 70634
Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 70633 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 70574
Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236
||| || ||||||||||| || || || || | || || |||| ||| ||| ||
Sbjct 70573 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATA-CTTCTGA 70516
Query 115237 CATCTTA---TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 115293
| || || | || || || | || | |||||| || || ||||| ||||| |
Sbjct 70515 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 70457
Query 115294 GACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGAGG 115351
|| ||||||| || || ||| || ||| | || || |||||| | ||| | |||
Sbjct 70456 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA--TTACCATTAATTCTCAGAAGG 70399
Query 115352 TAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
||| |||| ||||||||||||| ||||| ||
Sbjct 70398 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 70367
>seq42
Length=135705
Score = 127 bits (140), Expect = 2e-24
Identities = 384/583 (66%), Gaps = 19/583 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 4413 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 4472
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 4473 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 4532
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA- 126225
||||| ||| ||||| |||| | ||| ||||| || | || | | | |||
Sbjct 4533 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA-CAATGCATCGTCATCAGAAAT 4591
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA- 126283
||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || |
Sbjct 4592 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 4651
Query 126284 -AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342
| || ||| | ||| ||||||||||||||| |||| || || || || ||
Sbjct 4652 CAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGT 4708
Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401
||| ||| | | | ||| || | ||| | |||| || | |||||| |
Sbjct 4709 CTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAA 4767
Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461
|| |||||| | ||||| | | || ||| ||||| || || || |||
Sbjct 4768 GTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAG 4827
Query 126462 CAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 126515
|||| || || |||| | | | | |||||| |||||| ||||||| | | |
Sbjct 4828 CAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGATTAT 4884
Query 126516 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAG 126575
||||||| | | |||||| || |||| ||||| ||||||||| | || |
Sbjct 4885 TCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGG 4944
Query 126576 CCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618
||| ||| || | || ||| | | | | ||||||| |||||
Sbjct 4945 CCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 4987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352390358960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |