Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq38 246 4e-60
>seq38
Length=207422
Score = 246 bits (272), Expect = 4e-60
Identities = 962/1498 (64%), Gaps = 41/1498 (3%)
Strand=Plus/Minus
Query 109725 AAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTC 109784
|||||| ||||| | | || || ||||||||| | ||||| ||||||||||||||
Sbjct 71845 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 71786
Query 109785 ATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
|||| || || ||||| | ||| ||||| |||||||| || || | || | |||
Sbjct 71785 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 71726
Query 109845 TCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGT----CCCAATCATAACGACCAC 109900
|| | ||| | | || || || ||| || |||| || | || |
Sbjct 71725 TCTTAAACCTGTGGAA---ACAATCTTG-GCTTTGAGTGATTCCCATTC----CCACAGC 71674
Query 109901 TAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAAC 109960
| | | || ||||||| || ||| | | |||| || || |||||||
Sbjct 71673 TCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAAC 71616
Query 109961 CCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCG 110020
| | ||| | ||||| | || || | |||| || ||| || || || | || |
Sbjct 71615 CTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTG 71556
Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080
|||| || ||||| |||||||| ||| ||| | | | ||| | | || || |
Sbjct 71555 CATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAG 71496
Query 110081 GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140
||| | | ||||| |||| |||| ||| |||||||| | | | || || | ||
Sbjct 71495 GAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTAT 71436
Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCC 110197
||| || || | | ||| |||| ||||||||||| || | |||||| | |
Sbjct 71435 TACGCATATTCGATCTCCTAGC---TTCTGGAACGGGGTAAAAATTTCTGTCGATAATTC 71379
Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT- 110256
|| | || || || || ||||||||||| || || || | | | ||
Sbjct 71378 TGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGC 71319
Query 110257 --TTCGTCTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAG 110311
| || || | | | ||| | || ||||||||||| || | || || ||||
Sbjct 71318 AGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAG 71259
Query 110312 AAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGA 110371
|||||| || | | |||||| | |||||| || | ||| || |||||||
Sbjct 71258 CAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGA 71199
Query 110372 CACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGG 110431
|||||||||||||||| || | ||| ||| || ||||||||||| |||||| |||| |
Sbjct 71198 CACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAG 71139
Query 110432 TACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491
|||||||||| || |||| || || ||||| | ||| | | ||| || |||
Sbjct 71138 TACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTT 71079
Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551
| | ||||||||| ||||| | |||||| ||||||||||| | ||| || |
Sbjct 71078 GTCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGA 71019
Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611
| || | ||| || || | ||| |||| |||| ||||| ||| || || |
Sbjct 71018 CGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTA 70959
Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCC 110670
| || ||||||||||| ||||| ||||||| || | ||| | ||| | || || |
Sbjct 70958 CTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TC 70900
Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730
|| || | ||| ||||| || | || | ||| | | ||| || | ||||||||
Sbjct 70899 TCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGC 70840
Query 110731 TCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGT 110784
|| | || | ||| | || | | |||| ||| | |||| |||||| ||
Sbjct 70839 TCCAAGTACAAAGCAA---ATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGA 70783
Query 110785 GCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCC 110844
|| ||| ||||||||||| | ||| |||||||| |||| || ||| || |||||
Sbjct 70782 GCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCA 70723
Query 110845 CTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCAC 110904
||| ||| |||||||||| | || || |||| |||||| ||||| ||
Sbjct 70722 GCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTT 70663
Query 110905 TTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964
|| ||| ||||| || | | ||| | ||||| || ||||| || || ||
Sbjct 70662 TTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGC 70603
Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024
|||||| || || || || ||||| || || |||| || || || || || || |||
Sbjct 70602 ATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTA 70543
Query 111025 GGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083
|| | |||||| |||| | || | || ||| ||| || || || | | |
Sbjct 70542 GGAGAGGCATGAGTGAA-ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGC 70484
Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143
| || | ||| ||||| || || ||||| ||||| | || | |||||| |||
Sbjct 70483 AATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGC 70424
Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
| || |||| || | | |||||||| |||| || | |||||||| ||||||||
Sbjct 70423 AACATTACCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 70367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974807323600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |