Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08] 162 sequences; 9,346,869 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq38 219 5e-52 seq42 96.9 4e-15 >seq38 Length=207422 Score = 219 bits (242), Expect = 5e-52 Identities = 797/1234 (65%), Gaps = 25/1234 (2%) Strand=Plus/Minus Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||||||| ||| |||| | | || || || | |||||||| | || || || ||| Sbjct 71658 TCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAG 71599 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 | |||| | | || ||||| | || |||| | ||| || || || |||||| Sbjct 71598 GCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCA 71539 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 106273 || || || ||| | || |||||||| |||||||| | | || ||| Sbjct 71538 AAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATA 71479 Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333 || |||| || | |||||||||||||| | | |||||||| | |||||||| || | Sbjct 71478 AAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTC 71419 Query 106334 CGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 | || ||| |||||| |||||||||||||| || | || ||| | || ||||| Sbjct 71418 CTAGCT-TCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 71360 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTTC---A 106444 | || ||||||||||| || |||||| | | || ||| |||| || || Sbjct 71359 CACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGT--GAGTATCATCGGTT 71302 Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 | ||| | |||||| || || || ||||| || || ||||| ||||| ||| Sbjct 71301 TCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAA 71242 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | ||| || | |||||| || | ||| || ||||| ||||| ||||| ||| Sbjct 71241 GAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGG 71182 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 ||| | |||||||| || |||||||| || |||||| | || || || || || || ||| Sbjct 71181 TTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGT 71122 Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT 106682 | || || || || | ||| | | ||| || | || | | | || || | Sbjct 71121 GCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACGACCTT 71064 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || ||||| || ||| | | ||||| || || || |||||| || || | Sbjct 71063 CCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAG 71004 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | || | |||| |||| || | ||| | ||| || || || | |||||||| | Sbjct 71003 GAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACA 70944 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 106861 | || || ||||||| | | || | |||||| | | || ||| || | ||| ||| Sbjct 70943 GATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TCTCCTCTTTACCATGG 70885 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | |||| ||| | | ||| || || ||||||||||| | || | || Sbjct 70884 TTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCA 70825 Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | | || | || | ||| |||| | ||||| || || ||| ||| || || Sbjct 70824 AATGCACCAGGACGTTTG-TTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGAC 70766 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037 | | ||||||||||||||||| || ||| || || || ||| ||| | Sbjct 70765 CCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT 70706 Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097 ||| | | || ||| ||||||| ||||| || ||||| || |||||| ||||| Sbjct 70705 GGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACA 70646 Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157 ||| | | ||| | || || || | |||||||| ||| |||| | | ||| || Sbjct 70645 TTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACA 70586 Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217 ||||| || || || |||||||| || || || || || | || ||| |||| Sbjct 70585 TGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA 70526 Query 107218 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276 |||| | || ||| || || || || | || ||||||| || || || | Sbjct 70525 -ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAA 70467 Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||||| || |||||||||| || || ||| || Sbjct 70466 TGCCGATAGCAACACGCATAATCAAGTGTTGAGG 70433 >seq42 Length=135705 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| |||| | ||||||| ||||| |||||| | ||| Sbjct 4413 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 4472 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| | |||||||||||| | |||| ||| || || || || |||||||| Sbjct 4473 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCA-AAAGATCCTGAAAAGAAGAT 4531 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTC-- 117449 |||||| ||| || || |||| | || || ||||| | | | | || || Sbjct 4532 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA----CAATGCATCGTCATCAG 4587 Query 117450 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 || |||| |||| ||||| | ||||| | | |||||||| | || | |||||| Sbjct 4588 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGC 4645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979605288880