Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08] 162 sequences; 9,346,869 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq38 246 4e-60 seq42 96.9 4e-15 >seq38 Length=207422 Score = 246 bits (272), Expect = 4e-60 Identities = 800/1229 (65%), Gaps = 29/1229 (2%) Strand=Plus/Plus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 || || | ||||| || || |||||||| || || || ||||||| || | || | Sbjct 70440 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 70499 Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337 | || || ||| || | |||| |||| ||| || | || || || || || ||| Sbjct 70500 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 70558 Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397 ||||| || || || ||||| || ||| | | |||| ||| |||||||| Sbjct 70559 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 70618 Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457 | || || || | ||| | | ||| ||||| |||||| || ||||| || ||| Sbjct 70619 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 70678 Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517 || ||||||| ||| || | | |||| ||| ||| || || || ||| Sbjct 70679 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 70738 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || ||||||||||||||||| | | || || ||| ||| || || ||||| | ||| Sbjct 70739 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 70798 Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 | | || | | | ||| ||| || | |||||||| |||||||||||||| || Sbjct 70799 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 70857 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692 | | | ||| |||| | || ||||| ||| | || ||| || | | |||||| Sbjct 70858 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 70916 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 | || | | ||||||| || || || |||||||| | || || || ||| | | Sbjct 70917 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 70976 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || | || |||| |||| | || || || || |||||| || || || |||| Sbjct 70977 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 71036 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868 | | | ||| || || ||| |||| ||| | || ||| || | |||| Sbjct 71037 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 71092 Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928 | ||||| | || || || | |||| || || ||||| || |||| ||||| Sbjct 71093 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 71152 Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988 || ||||||||||||||||| || | |||||| ||||| ||||| || || ||| Sbjct 71153 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 71212 Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048 || |||||| |||||| | || ||| | ||| ||||| ||||| || || ||| Sbjct 71213 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 71272 Query 76049 GCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTG-----ATT 76100 || || || || |||||| | ||| | || || ||| |||| || | | Sbjct 71273 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACT--CACTGCTGGTACAACT 71330 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 |||||| || ||||||||||| || | ||||| || | ||| || | || |||| Sbjct 71331 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 71390 Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 |||||||||| |||||| ||| || | | || |||||||| | |||||||| | | Sbjct 71391 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 71449 Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279 |||||||||||||| | || |||| ||||| || | | |||||||| Sbjct 71450 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 71509 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 |||||||| || | ||| || || |||||||| || || || ||| | |||| || Sbjct 71510 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 71569 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 ||||| || | | |||| |||| || || || | |||||||| || || Sbjct 71570 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 71629 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428 || || | | || | ||| ||||||| Sbjct 71630 CAGGGCATTTTGCAATATGACTTGTGGGA 71658 >seq42 Length=135705 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052 |||||| | || | |||||||| | | ||||| | ||||| |||| |||| || Sbjct 4645 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 4586 Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111 || || | | | | ||||| || || | |||| || || ||| |||||||| Sbjct 4585 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 4530 Query 65112 CTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170 |||||| || || || || ||| |||| | |||||||||||| | ||||||||||||| Sbjct 4529 CTTCTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 4471 Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | | |||||| ||||| ||||||| | |||| ||||| | ||| || ||||| Sbjct 4470 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 4413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568391946560