Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq38 327 2e-84
seq42 212 9e-50
>seq38
Length=207422
Score = 327 bits (362), Expect = 2e-84
Identities = 1221/1901 (64%), Gaps = 41/1901 (2%)
Strand=Plus/Minus
Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422
|||| || | |||||||||||||| | | || | || ||||| || ||||||||||
Sbjct 72206 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 72147
Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482
| || || | ||| |||| || || || |||||||| || | ||| | |||
Sbjct 72146 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 72087
Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542
|| | | ||||| |||| ||| ||| ||||||||| | ||| |||||| || |
Sbjct 72086 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 72027
Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602
|||| | |||||| ||||||||| ||| ||||||| |||||| ||| ||| | |
Sbjct 72026 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 71967
Query 68603 CATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659
|| || | | | | ||||||||| || || || || || || ||| || |
Sbjct 71966 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 71907
Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719
| | ||| | ||| | ||| || | | | | | | |||||||| ||||
Sbjct 71906 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 71847
Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779
||||||| |||| ||| || | || | ||| || || || || ||||| | | | |
Sbjct 71846 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 71787
Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839
| || | ||||||||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 71786 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 71727
Query 68840 TTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898
|||| | ||| |||| | | | || |||| || || ||| ||||| || |||||
Sbjct 71726 TTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAG 71668
Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958
|| | ||| | || ||||| | ||| || | | ||| || || | |
Sbjct 71667 GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAG 71608
Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018
||||| || | |||||| | | |||| ||| || || || || | | ||
Sbjct 71607 GTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAG 71548
Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078
|| ||||| ||||||| |||| || | || |||||| || ||| || ||| | | |
Sbjct 71547 ATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCT 71489
Query 69079 AAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137
|| ||||| ||||| || || || ||||| || | | | |||||||||| | | |
Sbjct 71488 CAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCAT 71429
Query 69138 ATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197
||| || || ||||||||||| || ||| |||| | || |||||| | || | ||
Sbjct 71428 ATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTT 71369
Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAAC 69257
|| || ||||| | || | || || ||| | | | | | || |
Sbjct 71368 ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATC 71309
Query 69258 A--------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATT 69305
| |||| | | || || | ||| || | ||||| || || ||| |
Sbjct 71308 ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTC 71249
Query 69306 AGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATT 69365
| | |||| | || || || || ||| |||| || |||| ||
Sbjct 71248 CGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTT 71189
Query 69366 TTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTC 69425
| ||| ||| | ||||||||||| || ||||| || || || || ||||||||||||||
Sbjct 71188 CTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTC 71129
Query 69426 AATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA--- 69482
| || | || | || | | ||||| || || || ||| ||||
Sbjct 71128 TGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT---GGT-TTGTCTTC 71073
Query 69483 -ACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539
||| || ||||| ||| | ||| | || || ||||||||||| | || ||
Sbjct 71072 CACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGACGTC 71015
Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599
| | |||||| |||| ||||| | | || | ||| | ||| | | ||||
Sbjct 71014 GGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCT 70955
Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659
|||||| || ||||| || ||||| | ||| || | ||||| | ||| | || ||
Sbjct 70954 TTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTC 70895
Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719
|| || || || || ||| | || | | || || | ||||||||| || |
Sbjct 70894 TTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAA 70835
Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779
|| | || | | || || ||||| || || || || || | || | ||||||||
Sbjct 70834 GTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTT 70775
Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839
|| |||| |||| ||| |||||||||||||| || |||| || || |||| ||| ||
Sbjct 70774 GTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTA 70715
Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899
|||| | || ||||||||| ||| | ||| ||||| || || |||| |||||
Sbjct 70714 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGAT 70655
Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959
|| |||||| ||||| || || || || || || || ||||| |||| ||
Sbjct 70654 TAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAAC 70595
Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019
| ||||| |||||||| | || || || || ||||| | |||||||| ||
Sbjct 70594 TAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 70535
Query 70020 GTGAGTGAACCATTT----TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075
|||||||| | || ||| |||| || || ||||||||| || | | || |
Sbjct 70534 ATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGT 70479
Query 70076 C-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134
| ||| |||||| || || || |||||||| | || || ||||| |||||| |
Sbjct 70478 CATCAC-CATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA 70420
Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194
||| ||| ||| ||| ||||| ||| |||||| || || || ||||| ||||| ||
Sbjct 70419 TTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATAC 70360
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235
||||||||| ||||| | |||| |||| || || | |||
Sbjct 70359 TGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 70319
>seq42
Length=135705
Score = 212 bits (234), Expect = 9e-50
Identities = 565/854 (66%), Gaps = 12/854 (1%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| ||| ||| | || ||||| || || ||||| || |||| || || ||
Sbjct 4119 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 4178
Query 39386 TCCATGAAATCAAACGGATTAGTTG-CATTATAtttttttttAAATCCTAATTCTGAAAT 39444
|||||||| ||||| ||||| |||| | || || ||||| || | || |
Sbjct 4179 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 4237
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
| ||| || ||||| || || | || ||||| || ||||| || | |
Sbjct 4238 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 4297
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
|| || ||||| || || | || ||||||||| || || |||||||| || ||
Sbjct 4298 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 4357
Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624
| | || | || ||||| | | || |||||| ||| | ||||| || ||
Sbjct 4358 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 4417
Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684
|||| |||| ||||| ||||| | ||| | || || || || || | || |||||
Sbjct 4418 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 4477
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
||||| | ||| || | ||| || || | |||||||||||| ||||||||||| || ||
Sbjct 4478 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 4537
Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTT 39801
|| || || || ||||| | | || || | || | |||| | ||||| |
Sbjct 4538 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 4597
Query 39802 CTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860
| ||||| ||||| || |||||| | ||| || || || || || ||||| || ||
Sbjct 4598 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 4656
Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920
| | || | |||||| | || ||||| || | || || | || || |
Sbjct 4657 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGT 4716
Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980
| ||||| || ||| ||||| || |||||||| ||| ||||||| | || ||| ||||
Sbjct 4717 GAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCT 4776
Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040
| | || || ||||| |||| |||||||| || || || ||| || ||||| || |
Sbjct 4777 CAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 4836
Query 40041 CCAATACATGTTTA-ATAAAATATTTTTC---ATCGGGTGTCAATTTATTCCAGTCATTG 40096
| | || | | | || || ||||||| |||| | |||||||||||||
Sbjct 4837 CAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGC 4895
Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156
| ||| || | |||| ||| ||||| |||||||| || || || |||| ||||||
Sbjct 4896 AAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTAC 4955
Query 40157 ATGTTCCATATATC 40170
|| | ||| |||||
Sbjct 4956 ATTTGCCAGATATC 4969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907409009680
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