Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq15 152 1e-31
seq14 149 2e-30
seq1 129 1e-24
seq5 125 2e-23
>seq15
Length=213710
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || || ||||| || ||||| || |||||
Sbjct 97 CAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCAGAT 156
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 157 ACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 216
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || || |||||| | ||||| || |
Sbjct 217 CGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATT 276
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || || ||||| |||
Sbjct 277 CAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGA 315
>seq14
Length=162297
Score = 149 bits (164), Expect = 2e-30
Identities = 165/219 (75%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
|||||| | || ||||| || ||||| || ||||| || || ||||| || |||||||
Sbjct 161982 TTAAAAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGG 162041
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
| |||||||| || || || |||||| |||||||| || || ||||| || ||||
Sbjct 162042 AGTCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTC 162101
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| ||||||||||| | || || || || || || || ||||| || || |||||| | |
Sbjct 162102 CTGACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTG 162161
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||| ||| ||||||| ||||| || || || |||| ||
Sbjct 162162 ATTACAACATCCAAAAGGAATCCACCCTCCA-CTTGGTT 162199
>seq1
Length=598235
Score = 129 bits (142), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || || || || || || |||||| | ||||||||
Sbjct 366521 AAAATGC---AAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAG 366465
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| || || |||||||| |||||||||||||| || ||||| |||||
Sbjct 366464 TCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCT 366405
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| || || || ||||| || || || || | || ||||| || ||| | | ||
Sbjct 366404 GACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGAC 366345
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| ||||||| || || || |||| ||||
Sbjct 366344 TACAACATCCAAAAGGAGTCTACTTTGCA-CTTG 366312
>seq5
Length=629313
Score = 125 bits (138), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || || | || || || || || ||| | || || ||
Sbjct 463075 AAAATGC---AGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAG 463131
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 463132 TCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCT 463191
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| | || || || || || || || ||||| || || ||||| | ||
Sbjct 463192 GACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGAC 463251
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| |||| || || || || |||| || ||| ||||| | |||
Sbjct 463252 TACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGA 463299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728701505428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |