Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq90 1200 0.0 >seq90 Length=665 Score = 1200 bits (1330), Expect = 0.0 Identities = 665/665 (100%), Gaps = 0/665 (0%) Strand=Plus/Plus Query 29724 TAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACTACAGACTCTGGC 29783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACTACAGACTCTGGC 60 Query 29784 ATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCTTTTACAAAACCG 29843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCTTTTACAAAACCG 120 Query 29844 ATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 29903 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 180 Query 29904 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 29963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 240 Query 29964 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 30023 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 300 Query 30024 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 30083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 360 Query 30084 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 30143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 420 Query 30144 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 30203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 480 Query 30204 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 30263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 540 Query 30264 CCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATGGAAAAGGTCTGC 30323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 CCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATGGAAAAGGTCTGC 600 Query 30324 GTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTT 30383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTT 660 Query 30384 AATTT 30388 ||||| Sbjct 661 AATTT 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155084486922560