Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq19 167 4e-36
seq12 163 5e-35
seq4 154 3e-32
>seq19
Length=311624
Score = 167 bits (184), Expect = 4e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || || || || ||||||||||| || || || || || || ||||||
Sbjct 97520 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 97461
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || ||||| || | | ||| ||||| || ||||| ||||||||||||
Sbjct 97460 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 97401
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | ||| ||| || ||||| || | |||||||| || | ||| || ||
Sbjct 97400 TGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACCTCAAGGGTAATAGTC 97341
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| ||||||||
Sbjct 97340 TTACCTGTCAAGGTCTTGACGAAGATCTGCAT 97309
Score = 167 bits (184), Expect = 4e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || || || || ||||||||||| || || || || || || ||||||
Sbjct 97748 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 97689
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || ||||| || | | ||| ||||| || ||||| ||||||||||||
Sbjct 97688 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 97629
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | ||| ||| || || ||||||| ||| || ||||| | ||||| ||
Sbjct 97628 TGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTC 97569
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| ||||||||
Sbjct 97568 TTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
||||||||||| || ||||| || ||||| || || ||||| || || || || || |||
Sbjct 98204 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 98145
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | ||||| || ||||| || | | ||| ||||| || ||||| ||||||||||||
Sbjct 98144 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 98085
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | |||||| || || || |||| ||| ||||| || | ||||| ||
Sbjct 98084 TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTC 98025
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| ||||||||
Sbjct 98024 TTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97993
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || || |||||||| || || || || || || ||||||||
Sbjct 97973 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 97914
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || || | ||| || || || ||||| |||||||||||||||
Sbjct 97913 AGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 97854
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||| ||| || || ||||||| ||| || ||||| | ||||| || ||
Sbjct 97853 ATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTA 97794
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||||| || ||||||||
Sbjct 97793 CCAGTTAAAGTCTTGACAAAAATCTGCAT 97765
Score = 145 bits (160), Expect = 1e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || ||||||||||| ||||| || || || || || |||||
Sbjct 97289 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 97230
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||| ||||| || ||||| |||||||| ||||||
Sbjct 97229 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 97170
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||| || || ||||||| ||| || || || | ||||| || ||
Sbjct 97169 ATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTA 97110
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| || || || |||||||||
Sbjct 97109 CCTGTTAGGGTTTTAACAAAAATCTGCATT 97080
>seq12
Length=658291
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | || ||||| || |||||||| || || || || || || || |||||
Sbjct 86107 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 86048
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||||||||| || ||||| |||||||||||||||
Sbjct 86047 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGA 85988
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| ||||||||||| | || || ||||||||||| || || ||
Sbjct 85987 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTA 85928
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | |||||||||||| |||||||||
Sbjct 85927 CCGGTTAAGGTCTTGACGAAAATCTGCATT 85898
>seq4
Length=489129
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | || ||||| ||||||||||| || || || | || || ||||| ||
Sbjct 409878 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 409937
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || || | |||||||| || ||||| || |||||||| |||
Sbjct 409938 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGA 409997
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| || || ||||| | || || || ||||||||||| || ||
Sbjct 409998 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTA 410057
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || |||||||| ||||| || |||||| ||
Sbjct 410058 CCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 410090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620441552400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |