Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq89 1036 0.0
seq99 511 5e-140
seq94 363 2e-95
>seq89
Length=826
Score = 1036 bits (1148), Expect = 0.0
Identities = 582/587 (99%), Gaps = 0/587 (0%)
Strand=Plus/Minus
Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 587 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 528
Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 527 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 468
Query 8134 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 8193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 467 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 408
Query 8194 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 8253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 348
Query 8254 CTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 8313
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 CTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 288
Query 8314 ACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 8373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 ACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 228
Query 8374 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 8433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 168
Query 8434 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 8493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 108
Query 8494 CCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGTTGCCCATA 8553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 CCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGTTGCCCATA 48
Query 8554 GCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCC 8600
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47 GCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCC 1
>seq99
Length=339
Score = 511 bits (566), Expect = 5e-140
Identities = 292/298 (98%), Gaps = 0/298 (0%)
Strand=Plus/Minus
Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 298 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 239
Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 179
Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGCTCAGGATGCAAATTTTGAGGATGTTCAGC 96287
||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 178 GGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGC 119
Query 96288 GAGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 96347
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 GGGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 59
Query 96348 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTgggggggC 96405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGGGGC 1
>seq94
Length=478
Score = 363 bits (402), Expect = 2e-95
Identities = 206/208 (99%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 9297 AATGTTGTGTTGCAGTCCACAGACTGCAAAGTCTGCTTCAGGATGAAAGCCACTCAGTGT 9356
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1 AATGTTGTGTTGCAGTCCACAGACTGCAAAGTCTGCTCCAGGATGAAAGCCACTCAGTGT 60
Query 9357 TGGCAAATGTGCACATCCATTTATAAGGATGTCAACTACAGTCAGAGAACCCCTTTGTGT 9416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGGCAAATGTGCACATCCATTTATAAGGATGTCAACTACAGTCAGAGAACCCCTTTGTGT 120
Query 9417 TTGGTcccccccccGTGTCACATGTGGAACAGGGCCCAGTTGGCAAGTTGTACCAACCAA 9476
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTGGT-CCCCCCCCGTGTCACATGTGGAACAGGGCCCAGTTGGCAAGTTGTACCAACCAA 179
Query 9477 CTGAAGGGATTACATGCACTGCCCCGCG 9504
||||||||||||||||||||||||||||
Sbjct 180 CTGAAGGGATTACATGCACTGCCCCGCG 207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552715625476800
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