Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq89 1036 0.0 seq99 511 5e-140 seq94 363 2e-95 >seq89 Length=826 Score = 1036 bits (1148), Expect = 0.0 Identities = 582/587 (99%), Gaps = 0/587 (0%) Strand=Plus/Minus Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 587 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 528 Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 527 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 468 Query 8134 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 8193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 408 Query 8194 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 8253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 348 Query 8254 CTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 8313 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347 CTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 288 Query 8314 ACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 8373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 ACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 228 Query 8374 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 8433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 168 Query 8434 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 8493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 108 Query 8494 CCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGTTGCCCATA 8553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107 CCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGTTGCCCATA 48 Query 8554 GCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCC 8600 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47 GCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCC 1 >seq99 Length=339 Score = 511 bits (566), Expect = 5e-140 Identities = 292/298 (98%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 298 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 239 Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 179 Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGCTCAGGATGCAAATTTTGAGGATGTTCAGC 96287 ||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 178 GGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGC 119 Query 96288 GAGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 96347 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 GGGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 59 Query 96348 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTgggggggC 96405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGGGGC 1 >seq94 Length=478 Score = 363 bits (402), Expect = 2e-95 Identities = 206/208 (99%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 9297 AATGTTGTGTTGCAGTCCACAGACTGCAAAGTCTGCTTCAGGATGAAAGCCACTCAGTGT 9356 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1 AATGTTGTGTTGCAGTCCACAGACTGCAAAGTCTGCTCCAGGATGAAAGCCACTCAGTGT 60 Query 9357 TGGCAAATGTGCACATCCATTTATAAGGATGTCAACTACAGTCAGAGAACCCCTTTGTGT 9416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGGCAAATGTGCACATCCATTTATAAGGATGTCAACTACAGTCAGAGAACCCCTTTGTGT 120 Query 9417 TTGGTcccccccccGTGTCACATGTGGAACAGGGCCCAGTTGGCAAGTTGTACCAACCAA 9476 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTGGT-CCCCCCCCGTGTCACATGTGGAACAGGGCCCAGTTGGCAAGTTGTACCAACCAA 179 Query 9477 CTGAAGGGATTACATGCACTGCCCCGCG 9504 |||||||||||||||||||||||||||| Sbjct 180 CTGAAGGGATTACATGCACTGCCCCGCG 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715625476800