Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 109 5e-19
seq19 98.7 1e-15
seq12 93.3 4e-14
>seq4
Length=489129
Score = 109 bits (120), Expect = 5e-19
Identities = 144/196 (73%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| ||||||||||| || ||| | ||||| | ||| ||||| | |
Sbjct 409893 GACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCA 409952
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||||||||| ||||| || || || ||||| ||| | || | || |
Sbjct 409953 AAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTGAC 410011
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| ||||||||||| | || | || ||||| || || || |
Sbjct 410012 GTTG-TCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCT 410070
Query 138599 TTACAAAAATCTGCAT 138614
|||| ||||| |||||
Sbjct 410071 TTACGAAAATTTGCAT 410086
>seq19
Length=311624
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| || || | | | || |||||||| |||||||| || | ||| | ||| ||
Sbjct 97290 AACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTC 97231
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
||||| ||||| | | | |||| ||| || ||||| ||||| |||||||| || || |
Sbjct 97230 CAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCT-T 97172
Query 138525 GATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583
|| | || | ||| | | || | ||||| | ||||||||||| | || | || |
Sbjct 97171 GAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCT 97112
Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || || ||||| ||||||||||||||
Sbjct 97111 TACCTGTTAGGGTTTTAACAAAAATCTGCAT 97081
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| || || | | | || ||||| || ||||||||||| | ||| | || ||
Sbjct 97974 AACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTC 97915
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
||||| ||||| | | |||| ||||| || || || ||||| |||||||| ||||| |
Sbjct 97914 CAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT-T 97856
Query 138525 GATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583
|| | || | |||| | || | ||||| | |||||||| || | || | || |
Sbjct 97855 GAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCT 97796
Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||||| | ||| || ||||||||||||||
Sbjct 97795 TACCAGTTAAAGTCTTGACAAAAATCTGCAT 97765
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||| ||||| || | ||| | ||| || ||||| ||||| |
Sbjct 98186 GATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCG 98127
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539
|||| | ||| || ||||| ||||| |||||||| ||||| ||| | || | ||| |
Sbjct 98126 AAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTC-TTGAATCTTAGATTTGAC 98068
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| || | || || | ||||| ||||| | || | || |||||||| ||||| ||
Sbjct 98067 GTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTT 98008
Query 138600 TACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 98007 GACGAAAATCTGCAT 97993
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
||||| || || | | || |||||||| ||||||||||| | ||| | ||
Sbjct 97748 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 97689
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| | ||| ||||| | |||| | ||| || ||||| ||||| |||||||| |||||
Sbjct 97688 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 97629
Query 138523 GTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| | || | |||| | || | ||||| | |||||||| || | || | ||
Sbjct 97628 -TGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGT 97570
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||| | ||| || || |||||||||||
Sbjct 97569 CTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537
>seq12
Length=658291
Score = 93.3 bits (102), Expect = 4e-14
Identities = 173/250 (69%), Gaps = 8/250 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | || ||| | || | | |||||||| || ||||||||||| |
Sbjct 86125 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 86066
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || ||||| ||||| | | | || | ||| |||||||| |||||
Sbjct 86065 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 86006
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| ||||| ||| | || | || |||| || | |||||||| ||||| |
Sbjct 86005 ATTCCTTCCTTGTC-TTGAATCTTGGACTTGACATTG-TCGATGGTGTCGGAGGACTCGA 85948
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA----TGGCTTAT 138621
| || | || | || ||||| || | || || || |||||||||| || ||| |
Sbjct 85947 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTTTT 85888
Query 138622 AATATTATTC 138631
||| ||| ||
Sbjct 85887 AATGTTAGTC 85878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261345442400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |