Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq16 140 4e-28 >seq16 Length=1276502 Score = 140 bits (154), Expect = 4e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| ||||| ||||||| | ||||| || ||||| || || || | || | || Sbjct 1240009 CATTGCTTCTGCAGCTGCAGACGACTCATCCAAAAGAGAAGCATTGGCGACCGGGAGGCC 1240068 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || || |||||| |||||| |||||| |||| |||||||| ||||||| || Sbjct 1240069 TGTCAGATCACTGATGACAGTTTGGAAATTGAGTAAACTTTCCAATCGTCCCTGACTTAC 1240128 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | ||||| || ||||||||||||||||| | |||||||| || | || || | Sbjct 1240129 TTCGGGCTGATATGGGGTGTAAGATGTGTACCATCCTGGATTCTCGAGCAAATTACGAAG 1240188 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 || || || || ||||||| ||||| |||||| ||| || Sbjct 1240189 AATCACAGGAGGGATAATGGTGCCATAAAATCCTTTACCAAT 1240230 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| |||||| || || || || ||||| || ||||| ||||| || ||||||||| Sbjct 1238300 ACACAAATAGGGCCAACACCCGGTCCTCCTCCGCCATGAGGAATGGCAAAAGTCTTATGT 1238359 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 |||||||||||||||||||| || || ||| | ||| || || || || || ||| Sbjct 1238360 AAATTTAGATGACATACATCAGCTCCCAGGTCTCCTGGGGATGTTAATCCCACTTGAGCA 1238419 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTT 138355 || | || |||||||| | |||||| |||||||||| || ||| | ||| || Sbjct 1238420 TTCATGTTAGCACCATCTAAATATACTTGACCACCATGGTTATGGATGATATT 1238472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997169628400