Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq19 152 4e-32
seq12 98.7 8e-16
>seq19
Length=311624
Score = 152 bits (168), Expect = 4e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| || | || ||||| || || |||||||| ||||| ||||| ||||| | |
Sbjct 97307 CCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAA 97248
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || ||||| || |||||| | || || | |||||| || || |||
Sbjct 97247 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGA 97188
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || || ||||| ||| || | ||||||| | || | |||||| || || ||
Sbjct 97187 ATACCTTCCTTATCTTG-AATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCAC 97129
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||||| ||||| || || |||| |||||||||||| |||||||||||
Sbjct 97128 CTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97078
Score = 134 bits (148), Expect = 1e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| || || |||||||| || || ||||| || || | || || | | |||
Sbjct 97976 AGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 97917
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| ||||| || |||||| | |||| | ||||||||| || |||||||| || ||||||
Sbjct 97916 TCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT 97857
Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| || | || || | || | |||||| || || ||||||||||| |||||
Sbjct 97856 TG-AATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGT 97798
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| || || ||||| ||||||||
Sbjct 97797 CTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 97765
Score = 120 bits (132), Expect = 2e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| || || || ||||| ||||| ||||| || || | || || | | ||| ||
Sbjct 97745 ACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 97686
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || ||||| | ||||| | |||||| || || |||||||| || ||||||||
Sbjct 97685 AATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTG- 97627
Query 29698 AATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756
||| || | || || | || | |||||| || || ||||||||||| ||||| ||
Sbjct 97626 AATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTT 97567
Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||||| || || || || ||||||||
Sbjct 97566 ACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537
>seq12
Length=658291
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | ||| |||| || | || || || || || ||||| || || |
Sbjct 86125 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 86066
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || ||||| || |||||| | ||||| | ||| || || || |||
Sbjct 86065 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 86006
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| ||| || | |||||| | || | ||||| || || ||
Sbjct 86005 ATTCCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 85947
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| | || ||||| || || |||||||| || || || |||||||||||
Sbjct 85946 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218401873970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |