Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq19 134 9e-27 seq12 116 2e-21 seq4 100 2e-16 >seq19 Length=311624 Score = 134 bits (148), Expect = 9e-27 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| |||||||| ||||| ||||| ||||| |||| ||||||| Sbjct 97289 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 97230 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| |||||||| || ||||| || || | || ||||| ||| Sbjct 97229 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 97170 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | ||| || || ||| |||||| |||||| || | || || || || Sbjct 97169 ATCTTG-GATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTT 97111 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||| |||| ||||| |||||||||||||| || Sbjct 97110 ACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97078 Score = 125 bits (138), Expect = 4e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || || |||||||| | || ||||| || |||||| ||||||||||| || ||||| Sbjct 98222 TCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCA 98163 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 ||||| |||| ||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 98162 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 98103 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTC 34655 || | || ||||||||| ||| || | ||| ||| || ||| || ||| ||| Sbjct 98102 GGAATACCTTCCTTGTCT-TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTC 98044 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || ||||| |||| || || || ||||||||||| Sbjct 98043 TACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97993 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| |||||||| |||||||| ||||| || || ||| Sbjct 97763 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 97704 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| | ||| ||||| || || || ||||| || ||||| || || Sbjct 97703 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 97644 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| |||| || | ||| |||||| |||||| Sbjct 97643 ATACCTTCCTTGTCTTGAATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCAC 97585 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || ||||| ||||| || || || ||||||||||| Sbjct 97584 TTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| ||||| || ||||| || || ||||| |||| | ||||| Sbjct 97973 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 97914 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| || | ||| || || || || || | || ||||||||| Sbjct 97913 AGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 97854 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| |||| || | ||| |||||| ||||||||| | || || || || Sbjct 97853 ATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTT 97795 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| || || |||||||||||||| Sbjct 97794 ACCAGTTAAAGTCTTGACAAAAATCTGCAT 97765 >seq12 Length=658291 Score = 116 bits (128), Expect = 2e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || || || |||| ||||||| ||||| ||||| ||||| Sbjct 86090 CTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 86031 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || ||||| |||||||| || || | ||| ||||||||| ||||| | || || Sbjct 86030 AATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGAATCTTG-GACTTGACAT 85972 Query 34635 TAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| ||||||| ||| || || ||||||||||| || || | Sbjct 85971 TGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGA 85912 Query 34694 CAAAAATCTGCATGTT 34709 | ||||||||||| || Sbjct 85911 CGAAAATCTGCATTTT 85896 >seq4 Length=489129 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | ||| ||||||||| ||||| || || || | |||| | || || Sbjct 409878 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 409937 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||| ||||| ||||| || | |||||||||||| || || | |||||||||||| || Sbjct 409938 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTG 409996 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || | || ||| | ||| ||||| |||||| |||| ||| || || || Sbjct 409997 AATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTT 410056 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 |||||| | || || || ||||| ||||| ||| Sbjct 410057 ACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 410090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728947919610