Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq19 141 6e-29 seq12 109 4e-19 >seq19 Length=311624 Score = 141 bits (156), Expect = 6e-29 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| ||||||||||| || || || || |||||||| || || || || Sbjct 97078 AAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCA 97137 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | ||| | || ||| || || |||||| | || || || Sbjct 97138 TCAGACACTATTGATAATGTCAAATC-CAAGATTCAAGATAAGGAAGGTATTCCTCCTGA 97196 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || || |||||||| ||||| || || ||||||||||||| | ||| | ||||| Sbjct 97197 CCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTA 97256 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTT 23828 |||||| ||||| || ||||| | || || ||| |||| || Sbjct 97257 CAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATT 97298 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || || || || |||||||| || || || || | Sbjct 97993 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 98052 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | ||| || ||| ||||| |||||| | || || || || Sbjct 98053 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 98112 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || || || || || ||||||||||||| | ||| | |||||||| Sbjct 98113 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 98172 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||| || ||||| | || || || ||||| Sbjct 98173 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAG 98207 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || |||||||| ||||| || || | Sbjct 97537 ATGCAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 97596 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | |||| || ||| ||||| |||||| | || || || || Sbjct 97597 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 97656 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || || || || || ||| ||||||| | | ||| | || |||||| Sbjct 97657 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 97716 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | || || |||||||| || |||| || Sbjct 97717 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGGTGG 97763 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || || || |||||||| ||||| || || | Sbjct 97765 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 97824 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | |||| || ||| ||||| |||||| | || || ||||| Sbjct 97825 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 97884 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || ||||||||||| | | ||| | || |||||| Sbjct 97885 CAACGTCTGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAAC 97944 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| | || || ||| |||| || |||| || Sbjct 97945 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGAGGTGG 97991 >seq12 Length=658291 Score = 109 bits (120), Expect = 4e-19 Identities = 168/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| || ||| | || || || || || || | ||||| || ||| Sbjct 85896 AAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCC 85955 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || | || ||||| ||||| | || || || Sbjct 85956 TCCGACACCATCGACAATGTCAAGTCCAAGA-TTCAAGACAAGGAAGGAATTCCTCCTGA 86014 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| ||||| || ||||| || || ||||||||||||| | ||| | || || Sbjct 86015 CCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTA 86074 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 |||||| || || ||||| || || || | ||| | || ||| |||| || |||| Sbjct 86075 CAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCA 86130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008899686360