Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq19 154 4e-32
seq12 152 1e-31
seq52 93.3 1e-13
seq4 87.8 4e-12
>seq19
Length=311624
Score = 154 bits (170), Expect = 4e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| | || | ||||||||| ||||| ||||||| ||||| || | | ||||||
Sbjct 97754 AGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTA 97695
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | ||||| ||||||||||| | ||||| ||||| || ||||||||||||
Sbjct 97694 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCC 97635
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| ||| || || || |||||||| | ||||| || | |||
Sbjct 97634 TTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTG 97575
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || ||||| || | ||| | |||||
Sbjct 97574 ATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | |||||| |||||||| || |||| ||||| || | | |||||| ||
Sbjct 97980 TCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACC 97921
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| || ||||| ||||| ||||| || ||||| || || || ||||||||||||||
Sbjct 97920 ATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTT 97861
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| || || || |||||||| | ||||| || | |||||
Sbjct 97860 GTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGAT 97801
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || || ||||| ||
Sbjct 97800 AGTCTTACCAGTTAAAGTCTT 97780
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| | || | ||||||||| ||||| ||||||| ||||| || | | ||||||
Sbjct 97526 AGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTA 97467
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | ||||| ||||||||||| | ||||| ||||| || ||||||||||||
Sbjct 97466 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCC 97407
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| ||| || || ||||| || || | ||| || || | ||
Sbjct 97406 TTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACCTCAAGGGTA 97347
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || ||||| || || | ||| | |||||
Sbjct 97346 ATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 97309
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | |||||| |||||||| ||||||| |||||||| | | |||||| ||
Sbjct 97296 TCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACC 97237
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| || ||||| ||||| || || | ||||| ||||| || ||||||||||||||
Sbjct 97236 GTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTT 97177
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| ||||| || ||| || || |||||||| | ||||| || | |||||
Sbjct 97176 ATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGAT 97117
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || | ||||| | || | ||||||||
Sbjct 97116 AGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97078
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
|||||| | || | ||| ||||||||||| ||||| | ||||||||| | | ||||||
Sbjct 98211 AAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCT 98152
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|| ||||| || ||||| ||||||||||| | ||||| ||||| || |||||||||||
Sbjct 98151 ACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTC 98092
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
||||||||| ||||| || || || || || ||||| | || || || | ||
Sbjct 98091 CTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGT 98032
Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| ||||| || || | ||| || | ||| | |||||
Sbjct 98031 GATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97993
>seq12
Length=658291
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
|||||| || ||||| | ||| || || || |||| ||||| || | || |||||| ||
Sbjct 86114 TCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACC 86055
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| || ||||| ||||| || || | ||||||||||| || ||||| ||||||||
Sbjct 86054 GTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTT 85995
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| ||| ||||||||||| |||| || || || || || ||
Sbjct 85994 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 85935
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | ||| | ||||||||
Sbjct 85934 AGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85896
>seq52
Length=6006
Score = 93.3 bits (102), Expect = 1e-13
Identities = 192/283 (68%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTAT 7502
||||| || ||||||| || | ||| ||||| ||| | ||| | ||| | || |
Sbjct 181 TTATACTTTATATTTGCATTATTCTGTGG-ATTATTAGGATCAATAATGTCTTTAATATT 239
Query 7503 AAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562
||| ||||||||| | ||||| ||| |||||||| | ||||| ||| | | |||
Sbjct 240 AAGATTAGAATTATCAGCTCCTGGTAACCAAATATTAATGGGTAACCATCAATTATTCAA 299
Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622
|| | || || ||||| | | ||| | |||||||| || ||||| | | ||
Sbjct 300 TGTAGTAGCAACAGCACATGCTGTATTAATGGTATTCTTTTTAGTAATGCCAGCTGCAAT 359
Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682
||| ||| || |||| | | ||||||||||| ||||| ||||||| | ||| |
Sbjct 360 AGGATTTTTTGGTAATTATCTATTACCTTTAATGATAGGTGCAAGTGATATGTCATTTGC 419
Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725
|| | || ||||| ||||||||| |||| ||| | |||
Sbjct 420 TAGATTAAATAATATTTCATTTTGATTATTACCACCTGCTTTA 462
>seq4
Length=489129
Score = 87.8 bits (96), Expect = 4e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| |||||||||||||||||||| || || || || || ||||||||||| ||||||||
Sbjct 127910 GAAAATTTGACCATCAGTAATAGAAATGACGTTGGTTGGAATATAAGCAGAGACATCACC 127969
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580
|||| || || | || || || || || | || |||||||| || ||
Sbjct 127970 ACCTTGGGTCTCAATGACTGGCAAAGCGGTCAAAGAACCACCACCCAATTT 128020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528602517980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |