Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19 131 1e-25 seq12 127 1e-24 seq4 114 9e-21 >seq19 Length=311624 Score = 131 bits (144), Expect = 1e-25 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||||||| || |||| ||| || || ||||||||||||||||| || Sbjct 97539 CATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 97480 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || |||| ||||| || || ||||||||||| ||||| || Sbjct 97479 AGAAAGAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCA 97422 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGA 44283 | ||| | ||||||||| || ||||| ||| || ||| | ||||| || | || Sbjct 97421 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTT-AACGTTGTCAATGGTATCCGACGA 97363 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | ||||| ||||| || || | |||||| |||||||| ||||| Sbjct 97362 TTCTACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 97309 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||| ||||| || |||| |||||| ||| |||||||| || |||||||| | Sbjct 98219 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 98160 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| ||||| ||||| || || ||||||||||| ||||| || | || Sbjct 98159 AGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 98102 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || ||||| | || | ||| | || || || | || || Sbjct 98101 GAATACCTTCCTTGTCTTGAATCTT-AGATTTGACGTTATCAATAGTATCTGATGACTCT 98043 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 98042 ACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97993 Score = 109 bits (120), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||||||| || |||| ||| || || ||||||||||||||||| || Sbjct 97767 CATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 97708 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || |||| ||||| || || ||||||||||| ||||| || Sbjct 97707 AGAAAGAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCA 97650 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| ||| | | | || ||||| | || Sbjct 97649 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGAC 97590 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || | || || ||||| || || | ||||| ||||| || ||||| Sbjct 97589 TCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || | ||| | |||| ||| || ||| |||||||||||||||||||| Sbjct 97311 CATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATC 97252 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | |||| ||||| ||||| || ||||| || ||||| ||||| || Sbjct 97251 AGAAAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCA 97194 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| || | | | || ||||| | || Sbjct 97193 GGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGAC 97134 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | || || ||||| || || ||||| || || || || ||||| Sbjct 97133 TCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 97081 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| | ||| | |||| ||| || ||| ||||| ||||||||||| || Sbjct 97995 CATACCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 97936 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || ||||| ||||| || |||||||||| ||| |||||||| Sbjct 97935 AGAAAGAGTT--CTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCA 97878 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||||||| || ||||| ||| | | | || ||||| | || Sbjct 97877 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGAC 97818 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || | || || ||||| || || | ||||| || || || ||||| Sbjct 97817 TCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 97765 >seq12 Length=658291 Score = 127 bits (140), Expect = 1e-24 Identities = 171/234 (73%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||||| |||||||| | || |||||| ||||||||||| || Sbjct 86128 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 86069 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| ||||| ||||| || ||||| |||||||| || || || | Sbjct 86068 GACAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAG 86011 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 ||| | |||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 86010 GAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGA 85953 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 85952 CTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 85899 >seq4 Length=489129 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| | |||| ||| | || |||||||||||||||||| || | Sbjct 409860 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 409919 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || |||||||||| |||||| || || | || Sbjct 409920 AAAGTT--CTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 409977 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || ||||| ||| ||||| ||| | | | || ||||||| || |||| Sbjct 409978 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 410037 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || |||||||| ||||| |||||||| Sbjct 410038 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 410086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989654144890