Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq19 131 1e-25
seq12 127 1e-24
seq4 114 9e-21
>seq19
Length=311624
Score = 131 bits (144), Expect = 1e-25
Identities = 172/234 (74%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||||||| || |||| ||| || || ||||||||||||||||| ||
Sbjct 97539 CATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 97480
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | | || |||| ||||| || || ||||||||||| ||||| ||
Sbjct 97479 AGAAAGAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCA 97422
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGA 44283
| ||| | ||||||||| || ||||| ||| || ||| | ||||| || | ||
Sbjct 97421 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTT-AACGTTGTCAATGGTATCCGACGA 97363
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||| | ||||| ||||| || || | |||||| |||||||| |||||
Sbjct 97362 TTCTACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 97309
Score = 114 bits (126), Expect = 9e-21
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| ||||| ||||| || |||| |||||| ||| |||||||| || |||||||| |
Sbjct 98219 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 98160
Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| ||||| ||||| || || ||||||||||| ||||| || | ||
Sbjct 98159 AGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 98102
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287
| | ||||||||| || ||||| | || | ||| | || || || | || ||
Sbjct 98101 GAATACCTTCCTTGTCTTGAATCTT-AGATTTGACGTTATCAATAGTATCTGATGACTCT 98043
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 98042 ACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97993
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||||||| || |||| ||| || || ||||||||||||||||| ||
Sbjct 97767 CATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 97708
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | | || |||| ||||| || || ||||||||||| ||||| ||
Sbjct 97707 AGAAAGAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCA 97650
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||||||||| || ||||| ||| | | | || ||||| | ||
Sbjct 97649 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGAC 97590
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || | || || ||||| || || | ||||| ||||| || |||||
Sbjct 97589 TCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97537
Score = 104 bits (114), Expect = 2e-17
Identities = 164/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || | ||| | |||| ||| || ||| ||||||||||||||||||||
Sbjct 97311 CATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATC 97252
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | |||| ||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 97251 AGAAAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCA 97194
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||||||||| || ||||| || | | | || ||||| | ||
Sbjct 97193 GGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGAC 97134
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | || || ||||| || || ||||| || || || || |||||
Sbjct 97133 TCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 97081
Score = 100 bits (110), Expect = 2e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| | ||| | |||| ||| || ||| ||||| ||||||||||| ||
Sbjct 97995 CATACCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 97936
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | | || ||||| ||||| || |||||||||| ||| ||||||||
Sbjct 97935 AGAAAGAGTT--CTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCA 97878
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||||||||| || ||||| ||| | | | || ||||| | ||
Sbjct 97877 GGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGAC 97818
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || | || || ||||| || || | ||||| || || || |||||
Sbjct 97817 TCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 97765
>seq12
Length=658291
Score = 127 bits (140), Expect = 1e-24
Identities = 171/234 (73%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| ||||| |||||||| | || |||||| ||||||||||| ||
Sbjct 86128 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 86069
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| ||||| ||||| || ||||| |||||||| || || || |
Sbjct 86068 GACAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAG 86011
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
||| | |||||||| || ||||| ||| || ||| | |||||||||| |||
Sbjct 86010 GAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGA 85953
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| ||||| ||||| || || | |||||| ||||| || |||||
Sbjct 85952 CTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 85899
>seq4
Length=489129
Score = 114 bits (126), Expect = 9e-21
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||||| ||| | |||| ||| | || |||||||||||||||||| || |
Sbjct 409860 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 409919
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|||| | | || |||| ||||| || |||||||||| |||||| || || | ||
Sbjct 409920 AAAGTT--CTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 409977
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | || ||||| ||| ||||| ||| | | | || ||||||| || ||||
Sbjct 409978 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 410037
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || || ||||| || || |||||||| ||||| ||||||||
Sbjct 410038 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 410086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989654144890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |