Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq19 152 1e-31
seq4 129 1e-24
seq12 125 2e-23
>seq19
Length=311624
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||| | || || || || ||||| || || ||||| ||||||
Sbjct 97540 CAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCAGAC 97599
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 97600 ACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 97659
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | |||||||| || |||||| | || || ||| ||
Sbjct 97660 CGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATC 97719
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | ||||| ||||| |||
Sbjct 97720 CAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGA 97758
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || || ||||| || ||||| || |||||
Sbjct 97996 CAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCAGAT 98055
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 98056 ACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 98115
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || || |||||| | ||||| || |
Sbjct 98116 CGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATT 98175
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || || ||||| |||
Sbjct 98176 CAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGA 98214
Score = 149 bits (164), Expect = 2e-30
Identities = 165/219 (75%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
|||||| | || ||||| || ||||| || ||||| || || ||||| || |||||||
Sbjct 97073 TTAAAAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGG 97132
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
| |||||||| || || || |||||| |||||||| || || ||||| || ||||
Sbjct 97133 AGTCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTC 97192
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| ||||||||||| | || || || || || || || ||||| || || |||||| | |
Sbjct 97193 CTGACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTG 97252
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||| ||| ||||||| ||||| || || || |||| ||
Sbjct 97253 ATTACAACATCCAAAAGGAATCCACCCTCCA-CTTGGTT 97290
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | ||||| || || || ||||| ||||| ||| || ||
Sbjct 97312 CAGATCTTCGTCAAGACCTTGACAGGTAAGACTATTACCCTTGAGGTAGAATCGTCGGAT 97371
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 97372 ACCATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 97431
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | |||||||| || |||||| | || || ||| ||
Sbjct 97432 CGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATC 97491
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | ||||| ||||| |||
Sbjct 97492 CAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGA 97530
>seq4
Length=489129
Score = 129 bits (142), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || || || || || || |||||| | ||||||||
Sbjct 410089 AAAATGC---AAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAG 410033
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| || || |||||||| |||||||||||||| || ||||| |||||
Sbjct 410032 TCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCT 409973
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| || || || ||||| || || || || | || ||||| || ||| | | ||
Sbjct 409972 GACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGAC 409913
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| ||||||| || || || |||| ||||
Sbjct 409912 TACAACATCCAAAAGGAGTCTACTTTGCA-CTTG 409880
>seq12
Length=658291
Score = 125 bits (138), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || || | || || || || || ||| | || || ||
Sbjct 85896 AAAATGC---AGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAG 85952
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 85953 TCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCT 86012
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| | || || || || || || || ||||| || || ||||| | ||
Sbjct 86013 GACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGAC 86072
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| |||| || || || || |||| || ||| ||||| | |||
Sbjct 86073 TACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGA 86120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728578122980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |